Protein : Qrob_P0724360.2 Q. robur
Protein Identifier  ? Qrob_P0724360.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor). Code Enzyme  EC:1.3.99.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 245  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100853969 1 243 + 243 Gaps:48 100.00 291 72.85 5e-146 uncharacterized LOC100853969
blastp_kegg lcl|tcc:TCM_012726 1 244 + 244 Gaps:48 95.11 307 72.60 2e-145 FKBP-type peptidyl-prolyl cis-trans isomerase 5 isoform 1
blastp_kegg lcl|cmo:103501908 1 244 + 244 Gaps:48 95.11 307 72.95 8e-143 uncharacterized LOC103501908
blastp_kegg lcl|csv:101219154 1 244 + 244 Gaps:48 97.33 300 71.23 3e-140 uncharacterized LOC101219154
blastp_kegg lcl|pmum:103338706 1 244 + 244 Gaps:48 95.11 307 72.60 1e-139 uncharacterized LOC103338706
blastp_kegg lcl|pop:POPTR_0015s04430g 1 244 + 244 Gaps:48 100.00 292 70.21 3e-139 POPTRDRAFT_900773 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa009476mg 1 243 + 243 Gaps:48 100.00 291 72.16 2e-137 hypothetical protein
blastp_kegg lcl|fve:101310607 1 244 + 244 Gaps:48 95.11 307 72.60 3e-137 uncharacterized protein LOC101310607
blastp_kegg lcl|rcu:RCOM_0171070 1 244 + 244 Gaps:48 94.19 310 72.26 6e-137 hypothetical protein
blastp_kegg lcl|mdm:103455619 1 244 + 244 Gaps:48 94.81 308 70.55 1e-135 uncharacterized LOC103455619
rpsblast_cdd gnl|CDD|115611 24 204 + 181 Gaps:54 100.00 235 38.72 1e-52 pfam06966 DUF1295 Protein of unknown function (DUF1295). This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
rpsblast_cdd gnl|CDD|33547 63 212 + 150 Gaps:6 52.94 272 38.19 4e-24 COG3752 COG3752 Predicted membrane protein [Function unknown].
rpsblast_kog gnl|CDD|39849 1 244 + 244 Gaps:39 76.85 311 48.12 3e-40 KOG4650 KOG4650 KOG4650 Predicted steroid reductase [General function prediction only].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 157 161 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 162 183 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 108 137 30 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 62 90 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 32 42 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 43 61 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 4 244 241 PTHR32251:SF15 none none none
Phobius 138 156 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 93 161 69 PS50244 "Reactome:REACT_22258" Steroid 5-alpha reductase C-terminal domain profile. IPR001104
PANTHER 4 244 241 PTHR32251 none none none
Phobius 91 107 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 60 204 145 PF06966 none Protein of unknown function (DUF1295) IPR010721
Phobius 184 244 61 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

4 Localization

Analysis Start End Length
TMHMM 39 61 22
TMHMM 161 183 22
TMHMM 7 29 22
TMHMM 137 156 19

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting