Protein : Qrob_P0711430.2 Q. robur
Protein Identifier  ? Qrob_P0711430.2 Organism . Name  Quercus robur
Score  92.0 Score Type  egn
Protein Description  (M=2) 5.3.1.1 - Triose-phosphate isomerase. Code Enzyme  EC:5.3.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 299  
Kegg Orthology  K01803
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006096 glycolytic process The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
GO:0004807 triose-phosphate isomerase activity Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103334988 1 298 + 298 Gaps:24 100.00 318 80.19 4e-170 triosephosphate isomerase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa007813mg 1 298 + 298 Gaps:24 89.83 354 79.87 5e-170 hypothetical protein
blastp_kegg lcl|vvi:100260576 2 298 + 297 Gaps:37 99.38 324 77.95 7e-169 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|sly:101246286 1 298 + 298 Gaps:28 100.00 326 74.54 5e-168 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|brp:103864252 1 298 + 298 Gaps:24 100.00 312 79.49 2e-167 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|sot:102583463 1 298 + 298 Gaps:28 100.00 326 74.23 5e-167 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|pxb:103938349 1 298 + 298 Gaps:24 100.00 322 79.19 7e-167 triosephosphate isomerase chloroplastic
blastp_kegg lcl|gmx:100799358 1 298 + 298 Gaps:23 100.00 309 79.61 9e-167 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|pxb:103958482 18 298 + 281 Gaps:19 93.17 322 80.33 3e-166 triosephosphate isomerase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0660930 1 298 + 298 Gaps:19 100.00 313 77.00 6e-166 triosephosphate isomerase putative (EC:5.3.1.1)
blastp_pdb 1sw3_B 64 290 + 227 Gaps:17 97.58 248 59.92 9e-93 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1sw3_A 64 290 + 227 Gaps:17 97.58 248 59.92 9e-93 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2t_B 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2t_A 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2s_D 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2s_C 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2s_B 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2s_A 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2r_D 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_pdb 1r2r_C 60 290 + 231 Gaps:17 99.19 248 58.94 2e-92 mol:protein length:248 Triosephosphate isomerase
blastp_uniprot_sprot sp|P48496|TPIC_SPIOL 1 298 + 298 Gaps:24 100.00 322 76.09 1e-165 Triosephosphate isomerase chloroplastic OS Spinacia oleracea GN TPIP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M4S8|TPIC_FRAAN 1 298 + 298 Gaps:28 100.00 314 77.07 2e-162 Triosephosphate isomerase chloroplastic OS Fragaria ananassa GN TPI PE 1 SV 1
blastp_uniprot_sprot sp|Q9SKP6|TPIC_ARATH 3 298 + 296 Gaps:23 100.00 315 77.46 9e-160 Triosephosphate isomerase chloroplastic OS Arabidopsis thaliana GN TIM PE 1 SV 1
blastp_uniprot_sprot sp|P46225|TPIC_SECCE 56 298 + 243 Gaps:16 86.91 298 75.68 5e-140 Triosephosphate isomerase chloroplastic OS Secale cereale PE 1 SV 1
blastp_uniprot_sprot sp|P48497|TPIS_STELP 64 298 + 235 Gaps:19 98.83 257 66.54 3e-115 Triosephosphate isomerase cytosolic OS Stellaria longipes GN TPI PE 1 SV 1
blastp_uniprot_sprot sp|P46226|TPIS_SECCE 64 294 + 231 Gaps:19 98.02 253 58.06 2e-99 Triosephosphate isomerase cytosolic OS Secale cereale PE 2 SV 3
blastp_uniprot_sprot sp|P12863|TPIS_MAIZE 64 294 + 231 Gaps:19 98.02 253 58.47 2e-98 Triosephosphate isomerase cytosolic OS Zea mays PE 3 SV 3
blastp_uniprot_sprot sp|P48494|TPIS_ORYSJ 64 294 + 231 Gaps:19 98.02 253 58.87 1e-97 Triosephosphate isomerase cytosolic OS Oryza sativa subsp. japonica GN TPI PE 1 SV 3
blastp_uniprot_sprot sp|P48491|TPIS_ARATH 64 297 + 234 Gaps:19 98.82 254 58.57 3e-97 Triosephosphate isomerase cytosolic OS Arabidopsis thaliana GN CTIMC PE 1 SV 2
blastp_uniprot_sprot sp|P48495|TPIS_PETHY 64 297 + 234 Gaps:19 98.82 254 58.96 3e-97 Triosephosphate isomerase cytosolic OS Petunia hybrida GN TPIP1 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 14 14 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 2 9 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 10 14 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
TIGRFAM 81 280 200 TIGR00419 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" tim: triose-phosphate isomerase IPR000652
Hamap 63 291 229 MF_00147_B "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" Triosephosphate isomerase [tpiA]. IPR022896
ProSitePatterns 206 216 11 PS00171 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" Triosephosphate isomerase active site. IPR020861
PANTHER 53 298 246 PTHR21139:SF4 none none none
Pfam 80 288 209 PF00121 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" Triosephosphate isomerase IPR000652
Phobius 15 298 284 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 53 298 246 PTHR21139 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138";signature_desc=TRIOSEPHOSPHATE ISOMERASE none IPR000652
ProSiteProfiles 35 290 256 PS51440 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" Triosephosphate isomerase (TIM) family profile. IPR000652
SUPERFAMILY 62 291 230 SSF51351 "KEGG:00010+5.3.1.1","KEGG:00051+5.3.1.1","KEGG:00562+5.3.1.1","KEGG:00710+5.3.1.1","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6142","MetaCyc:PWY-7003","UniPathway:UPA00109","UniPathway:UPA00138" none IPR000652
Gene3D 80 292 213 G3DSA:3.20.20.70 none none IPR013785

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

0 Targeting