Protein : Qrob_P0702350.2 Q. robur
Protein Identifier  ? Qrob_P0702350.2 Organism . Name  Quercus robur
Score  94.3 Score Type  egn
Protein Description  (M=3) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 655  
Kegg Orthology  K11984
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0000398 mRNA splicing, via spliceosome The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266959 5 628 + 624 Gaps:20 68.29 902 75.32 0.0 uncharacterized LOC100266959
blastp_kegg lcl|pop:POPTR_0001s11550g 5 626 + 622 Gaps:10 71.93 862 74.68 0.0 POPTRDRAFT_640254 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000914mg 20 628 + 609 Gaps:33 66.46 963 73.44 0.0 hypothetical protein
blastp_kegg lcl|pmum:103324194 20 626 + 607 Gaps:31 83.29 766 72.26 0.0 U4/U6.U5 tri-snRNP-associated protein 1
blastp_kegg lcl|mdm:103453126 5 626 + 622 Gaps:35 69.03 946 71.67 0.0 U4/U6.U5 tri-snRNP-associated protein 1-like
blastp_kegg lcl|tcc:TCM_032152 5 628 + 624 Gaps:17 68.69 907 76.24 0.0 U4/U6.U5 tri-snRNP-associated protein 1 isoform 1
blastp_kegg lcl|rcu:RCOM_0800560 5 626 + 622 Gaps:16 70.56 873 74.19 0.0 hypothetical protein
blastp_kegg lcl|cit:102613242 5 628 + 624 Gaps:22 70.39 878 72.82 0.0 U4/U6.U5 tri-snRNP-associated protein 1-like
blastp_kegg lcl|cic:CICLE_v10000233mg 5 628 + 624 Gaps:22 70.39 878 72.49 0.0 hypothetical protein
blastp_kegg lcl|mdm:103425697 2 626 + 625 Gaps:33 93.58 701 69.21 0.0 U4/U6.U5 tri-snRNP-associated protein 1-like
blastp_uniprot_sprot sp|O43290|SNUT1_HUMAN 398 591 + 194 Gaps:22 26.00 800 37.02 5e-23 U4/U6.U5 tri-snRNP-associated protein 1 OS Homo sapiens GN SART1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5XIW8|SNUT1_RAT 398 591 + 194 Gaps:20 25.81 806 36.54 1e-22 U4/U6.U5 tri-snRNP-associated protein 1 OS Rattus norvegicus GN Sart1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z315|SNUT1_MOUSE 398 591 + 194 Gaps:20 25.81 806 36.54 1e-22 U4/U6.U5 tri-snRNP-associated protein 1 OS Mus musculus GN Sart1 PE 2 SV 1
blastp_uniprot_sprot sp|O94538|SNU66_SCHPO 305 552 + 248 Gaps:71 44.53 649 29.76 2e-07 U4/U6.U5 tri-snRNP-associated protein snu66 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN snu66 PE 1 SV 1
rpsblast_cdd gnl|CDD|202600 7 553 + 547 Gaps:101 88.56 603 35.96 6e-68 pfam03343 SART-1 SART-1 family. SART-1 is a protein involved in cell cycle arrest and pre-mRNA splicing. It has been shown to be a component of U4/U6 x U5 tri-snRNP complex in human Schizosaccharomyces pombe and Saccharomyces cerevisiae. SART-1 is a known tumour antigen in a range of cancers recognised by T cells.
rpsblast_kog gnl|CDD|37428 6 595 + 590 Gaps:17 82.13 705 34.72 9e-90 KOG2217 KOG2217 KOG2217 U4/U6.U5 snRNP associated protein [RNA processing and modification].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 6 626 621 PTHR14152 none none none
PANTHER 6 626 621 PTHR14152:SF5 none none IPR005011
Coils 258 293 36 Coil none none none
Coils 540 561 22 Coil none none none
Coils 176 197 22 Coil none none none
Pfam 10 553 544 PF03343 none SART-1 family IPR005011

0 Localization

0 Qtllist

0 Targeting