Protein : Qrob_P0700410.2 Q. robur
Protein Identifier  ? Qrob_P0700410.2 Organism . Name  Quercus robur
Score  41.0 Score Type  egn
Protein Description  (M=1) KOG1863//KOG1993//KOG4598 - Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport]. // Putative ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 583  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mtr:MTR_127s0008 226 347 + 122 none 33.15 368 84.43 5e-64 Ubiquitin carboxyl-terminal hydrolase family protein
blastp_kegg lcl|pvu:PHAVU_006G007000g 226 347 + 122 none 32.36 377 82.79 2e-63 hypothetical protein
blastp_kegg lcl|vvi:100244518 226 347 + 122 none 10.92 1117 86.07 1e-62 ubiquitin carboxyl-terminal hydrolase 12-like
blastp_kegg lcl|mus:103983512 226 347 + 122 none 10.94 1115 86.89 3e-62 ubiquitin carboxyl-terminal hydrolase 13
blastp_kegg lcl|mus:103982495 226 347 + 122 none 10.94 1115 86.07 6e-62 ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
blastp_kegg lcl|csv:101215022 226 347 + 122 none 10.99 1110 86.89 7e-62 ubiquitin carboxyl-terminal hydrolase 12-like
blastp_kegg lcl|cmo:103486723 226 347 + 122 none 10.97 1112 86.89 9e-62 ubiquitin carboxyl-terminal hydrolase 12
blastp_kegg lcl|rcu:RCOM_0423090 226 347 + 122 none 10.89 1120 86.07 1e-61 Ubiquitin carboxyl-terminal hydrolase putative (EC:3.1.2.15)
blastp_kegg lcl|mdm:103438821 226 347 + 122 none 27.23 448 81.97 2e-61 ubiquitin carboxyl-terminal hydrolase 13-like
blastp_kegg lcl|mdm:103407387 226 347 + 122 none 31.77 384 81.97 2e-61 ubiquitin carboxyl-terminal hydrolase 12-like
blastp_pdb 2f1z_B 227 349 + 123 Gaps:12 23.95 522 57.60 1e-32 mol:protein length:522 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 2f1z_A 227 349 + 123 Gaps:12 23.95 522 57.60 1e-32 mol:protein length:522 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 1nbf_E 255 349 + 95 Gaps:5 27.76 353 64.29 7e-31 mol:protein length:353 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 1nbf_B 255 349 + 95 Gaps:5 27.76 353 64.29 7e-31 mol:protein length:353 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 1nbf_A 255 349 + 95 Gaps:5 27.76 353 64.29 7e-31 mol:protein length:353 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 1nb8_B 255 349 + 95 Gaps:5 27.76 353 64.29 7e-31 mol:protein length:353 Ubiquitin carboxyl-terminal hydrolase 7
blastp_pdb 1nb8_A 255 349 + 95 Gaps:5 27.76 353 64.29 7e-31 mol:protein length:353 Ubiquitin carboxyl-terminal hydrolase 7
blastp_uniprot_sprot sp|Q9FPT1|UBP12_ARATH 226 347 + 122 none 10.93 1116 83.61 8e-61 Ubiquitin carboxyl-terminal hydrolase 12 OS Arabidopsis thaliana GN UBP12 PE 1 SV 2
blastp_uniprot_sprot sp|Q84WU2|UBP13_ARATH 226 347 + 122 none 10.94 1115 84.43 8e-61 Ubiquitin carboxyl-terminal hydrolase 13 OS Arabidopsis thaliana GN UBP13 PE 1 SV 1
blastp_uniprot_sprot sp|Q93009|UBP7_HUMAN 227 349 + 123 Gaps:12 11.34 1102 57.60 3e-31 Ubiquitin carboxyl-terminal hydrolase 7 OS Homo sapiens GN USP7 PE 1 SV 2
blastp_uniprot_sprot sp|Q4VSI4|UBP7_RAT 227 349 + 123 Gaps:12 11.33 1103 57.60 3e-31 Ubiquitin carboxyl-terminal hydrolase 7 OS Rattus norvegicus GN Usp7 PE 1 SV 1
blastp_uniprot_sprot sp|Q6A4J8|UBP7_MOUSE 227 349 + 123 Gaps:12 11.33 1103 57.60 3e-31 Ubiquitin carboxyl-terminal hydrolase 7 OS Mus musculus GN Usp7 PE 1 SV 1
blastp_uniprot_sprot sp|Q6U7I1|UBP7_CHICK 227 349 + 123 Gaps:12 11.35 1101 57.60 3e-31 Ubiquitin carboxyl-terminal hydrolase 7 OS Gallus gallus GN USP7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VYQ8|UBP7_DROME 225 348 + 124 Gaps:8 10.81 1129 53.28 6e-27 Ubiquitin carboxyl-terminal hydrolase 7 OS Drosophila melanogaster GN Usp7 PE 1 SV 1
blastp_uniprot_sprot sp|P50101|UBP15_YEAST 248 347 + 100 Gaps:1 8.05 1230 55.56 7e-26 Ubiquitin carboxyl-terminal hydrolase 15 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UBP15 PE 1 SV 1
blastp_uniprot_sprot sp|Q09879|UBP5_SCHPO 252 342 + 91 Gaps:5 8.12 1108 65.56 3e-25 Probable ubiquitin carboxyl-terminal hydrolase 5 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ubp5 PE 3 SV 3
blastp_uniprot_sprot sp|Q9UTT1|UBP21_SCHPO 229 342 + 114 Gaps:7 10.54 1129 52.10 3e-25 Ubiquitin carboxyl-terminal hydrolase 21 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ubp21 PE 3 SV 2
rpsblast_cdd gnl|CDD|34681 229 342 + 114 Gaps:7 10.93 1089 54.62 9e-32 COG5077 COG5077 Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|73065 259 350 + 92 Gaps:7 29.64 334 55.56 7e-30 cd02659 peptidase_C19C A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates which could rescue them from degradation as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell and with over 50 members family C19 is one of the largest families of peptidases in the human genome..
rpsblast_cdd gnl|CDD|177905 416 484 + 69 Gaps:5 8.05 919 60.81 7e-18 PLN02264 PLN02264 lipoxygenase.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 236 347 112 PTHR24619 none none none
ProSitePatterns 262 277 16 PS00972 none Ubiquitin specific protease (USP) domain signature 1. IPR018200
PANTHER 236 347 112 PTHR24619:SF121 none none none
ProSiteProfiles 261 582 322 PS50235 none Ubiquitin specific protease (USP) domain profile. IPR028889
SUPERFAMILY 256 342 87 SSF54001 none none none
Pfam 260 342 83 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting