Protein : Qrob_P0700100.2 Q. robur
Protein Identifier  ? Qrob_P0700100.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K04802 - proliferating cell nuclear antigen Gene Prediction Quality  validated
Protein length 

Sequence

Length: 211  
Kegg Orthology  K04802
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0006275 regulation of DNA replication Any process that modulates the frequency, rate or extent of DNA replication.
GO:0030337 DNA polymerase processivity factor activity An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102581875 1 157 + 157 none 59.47 264 94.90 1e-104 proliferating cell nuclear antigen-like
blastp_kegg lcl|sly:544248 1 157 + 157 none 59.47 264 94.90 1e-104 pcna proliferating cell nuclear antigen
blastp_kegg lcl|cam:101508463 1 157 + 157 none 59.02 266 92.99 5e-104 proliferating cell nuclear antigen-like
blastp_kegg lcl|vvi:100248466 1 157 + 157 none 59.02 266 93.63 7e-104 proliferating cell nuclear antigen-like
blastp_kegg lcl|gmx:548079 1 157 + 157 none 59.02 266 93.63 7e-104 PCNA proliferating cell nuclear antigen
blastp_kegg lcl|brp:103868024 1 157 + 157 none 59.70 263 93.63 7e-104 proliferating cellular nuclear antigen 1
blastp_kegg lcl|tcc:TCM_041691 1 157 + 157 none 59.02 266 92.99 1e-103 Proliferating cell nuclear antigen
blastp_kegg lcl|cmo:103502047 1 157 + 157 none 59.02 266 92.99 2e-103 proliferating cell nuclear antigen
blastp_kegg lcl|csv:101208473 1 157 + 157 none 59.02 266 92.99 2e-103 proliferating cell nuclear antigen-like
blastp_kegg lcl|gmx:100817651 1 157 + 157 none 59.02 266 92.99 3e-103 proliferating cell nuclear antigen-like
blastp_pdb 2zvv_B 1 157 + 157 none 56.88 276 92.36 3e-104 mol:protein length:276 Proliferating cellular nuclear antigen 1
blastp_pdb 2zvv_A 1 157 + 157 none 56.88 276 92.36 3e-104 mol:protein length:276 Proliferating cellular nuclear antigen 1
blastp_pdb 2zvw_H 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_G 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_F 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_E 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_D 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_C 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_B 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_pdb 2zvw_A 1 157 + 157 none 57.09 275 91.72 3e-103 mol:protein length:275 Proliferating cell nuclear antigen 2
blastp_uniprot_sprot sp|O82134|PCNA_PEA 1 157 + 157 none 59.02 266 94.90 2e-106 Proliferating cell nuclear antigen OS Pisum sativum GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|O82797|PCNA_TOBAC 1 157 + 157 none 59.47 264 94.27 2e-105 Proliferating cell nuclear antigen OS Nicotiana tabacum GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|Q00268|PCNA1_DAUCA 1 157 + 157 none 59.47 264 93.63 3e-105 Proliferating cell nuclear antigen OS Daucus carota PE 3 SV 1
blastp_uniprot_sprot sp|Q9M7Q7|PCNA1_ARATH 1 157 + 157 none 59.70 263 92.36 4e-104 Proliferating cellular nuclear antigen 1 OS Arabidopsis thaliana GN PCNA PE 1 SV 2
blastp_uniprot_sprot sp|P24314|PCNA_CATRO 1 157 + 157 none 58.58 268 93.63 7e-104 Proliferating cell nuclear antigen OS Catharanthus roseus PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZW35|PCNA2_ARATH 1 157 + 157 none 59.47 264 91.72 5e-103 Proliferating cell nuclear antigen 2 OS Arabidopsis thaliana GN PCNA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q43124|PCNA_BRANA 1 157 + 157 none 59.70 263 91.08 1e-102 Proliferating cell nuclear antigen OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|Q43266|PCNA_MAIZE 1 157 + 157 none 59.70 263 90.45 2e-102 Proliferating cell nuclear antigen OS Zea mays GN PCNA PE 2 SV 1
blastp_uniprot_sprot sp|P17070|PCNA_ORYSJ 1 157 + 157 none 59.70 263 90.45 2e-102 Proliferating cell nuclear antigen OS Oryza sativa subsp. japonica GN Os02g0805200 PE 2 SV 2
blastp_uniprot_sprot sp|Q00265|PCNA2_DAUCA 1 157 + 157 none 43.01 365 89.81 9e-102 Proliferating cell nuclear antigen large form OS Daucus carota PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 1 157 157 TIGR00590 none pcna: proliferating cell nuclear antigen (pcna) IPR000730
ProSitePatterns 61 79 19 PS00293 none Proliferating cell nuclear antigen signature 2. IPR022659
ProSitePatterns 34 57 24 PS01251 none Proliferating cell nuclear antigen signature 1. IPR022659
PANTHER 1 157 157 PTHR11352 none none IPR000730
Pfam 127 157 31 PF02747 none Proliferating cell nuclear antigen, C-terminal domain IPR022649
SUPERFAMILY 127 157 31 SSF55979 none none none
Gene3D 1 156 156 G3DSA:3.70.10.10 none none none
SUPERFAMILY 1 126 126 SSF55979 none none none
Pfam 1 125 125 PF00705 none Proliferating cell nuclear antigen, N-terminal domain IPR022648
PRINTS 56 80 25 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PRINTS 110 132 23 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PRINTS 34 52 19 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730
PRINTS 10 29 20 PR00339 none Proliferating cell nuclear antigen (cyclin) signature IPR000730

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting