Protein : Qrob_P0697920.2 Q. robur
Protein Identifier  ? Qrob_P0697920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K09284 - AP2-like factor, euAP2 lineage Gene Prediction Quality  validated
Protein length 

Sequence

Length: 485  
Kegg Orthology  K09284
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s13460g 4 462 + 459 Gaps:61 97.58 496 57.85 6e-150 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0819800 50 471 + 422 Gaps:54 87.37 467 62.50 4e-147 Floral homeotic protein APETALA2 putative (EC:1.3.1.74)
blastp_kegg lcl|pmum:103337713 94 482 + 389 Gaps:51 85.23 474 62.62 1e-146 AP2-like ethylene-responsive transcription factor TOE3
blastp_kegg lcl|pper:PRUPE_ppa005230mg 94 482 + 389 Gaps:51 85.77 471 62.38 1e-145 hypothetical protein
blastp_kegg lcl|gmx:100797238 4 454 + 451 Gaps:69 95.20 458 60.78 3e-145 ethylene-responsive transcription factor RAP2-7-like
blastp_kegg lcl|tcc:TCM_022077 4 467 + 464 Gaps:69 98.78 493 55.65 8e-145 AP2.7 isoform 1
blastp_kegg lcl|gmx:100808212 4 463 + 460 Gaps:71 97.82 459 58.80 2e-142 ethylene-responsive transcription factor RAP2-7-like
blastp_kegg lcl|pop:POPTR_0016s08530g 38 478 + 441 Gaps:67 95.88 461 60.41 3e-140 POPTRDRAFT_576640 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_001G174400g 4 463 + 460 Gaps:69 97.82 459 56.35 7e-138 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g100590 4 456 + 453 Gaps:59 95.97 471 57.08 3e-136 Transcription factor
blastp_uniprot_sprot sp|Q9SK03|RAP27_ARATH 4 449 + 446 Gaps:99 99.11 449 46.52 6e-78 Ethylene-responsive transcription factor RAP2-7 OS Arabidopsis thaliana GN RAP2-7 PE 2 SV 2
blastp_uniprot_sprot sp|P47927|AP2_ARATH 88 318 + 231 Gaps:38 61.81 432 57.68 3e-77 Floral homeotic protein APETALA 2 OS Arabidopsis thaliana GN AP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FH95|TOE3_ARATH 141 318 + 178 Gaps:19 55.97 352 63.45 8e-71 AP2-like ethylene-responsive transcription factor TOE3 OS Arabidopsis thaliana GN TOE3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVG2|TOE2_ARATH 149 469 + 321 Gaps:66 67.84 485 42.86 2e-53 AP2-like ethylene-responsive transcription factor TOE2 OS Arabidopsis thaliana GN TOE2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 129 305 + 177 Gaps:35 37.99 558 40.57 3e-37 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 106 306 + 201 Gaps:47 53.98 415 46.88 4e-37 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 159 305 + 147 Gaps:39 32.75 568 51.08 9e-36 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 159 304 + 146 Gaps:39 32.23 574 50.81 9e-36 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ4|BBM_ARATH 144 304 + 161 Gaps:37 33.90 584 39.90 7e-35 AP2-like ethylene-responsive transcription factor BBM OS Arabidopsis thaliana GN BBM PE 2 SV 2
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 150 304 + 155 Gaps:30 31.95 579 42.16 1e-34 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 162 298 + 137 Gaps:22 100.00 64 54.69 3e-20 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 234 292 + 59 none 96.72 61 50.85 4e-16 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 144 442 299 PTHR32467 none none IPR031112
PRINTS 274 294 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 236 247 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
ProSiteProfiles 235 292 58 PS51032 none AP2/ERF domain profile. IPR001471
Pfam 234 284 51 PF00847 none AP2 domain IPR001471
Pfam 161 182 22 PF00847 none AP2 domain IPR001471
SMART 235 298 64 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
SMART 162 205 44 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PANTHER 144 442 299 PTHR32467:SF3 none none none
SUPERFAMILY 234 292 59 SSF54171 none none IPR016177
SUPERFAMILY 161 201 41 SSF54171 none none IPR016177
Gene3D 235 292 58 G3DSA:3.30.730.10 none none IPR001471

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting