Protein : Qrob_P0690530.2 Q. robur
Protein Identifier  ? Qrob_P0690530.2 Organism . Name  Quercus robur
Score  31.1 Score Type  egn
Protein Description  (M=9) K15014 - solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 450  
Kegg Orthology  K15014
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0005337 nucleoside transmembrane transporter activity Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030015 1 446 + 446 Gaps:30 99.05 420 78.61 0.0 Major facilitator superfamily protein
blastp_kegg lcl|pmum:103324619 1 449 + 449 Gaps:32 100.00 421 74.58 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|pper:PRUPE_ppa006222mg 1 449 + 449 Gaps:32 100.00 421 74.35 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s03250g 1 446 + 446 Gaps:40 100.00 426 73.47 0.0 POPTRDRAFT_758579 equilibrative nucleoside transporter family protein
blastp_kegg lcl|pxb:103939631 1 449 + 449 Gaps:31 100.00 420 72.38 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|vvi:100256745 1 449 + 449 Gaps:32 100.00 417 76.98 0.0 equilibrative nucleoside transporter 2-like
blastp_kegg lcl|sot:102592247 1 449 + 449 Gaps:59 100.00 448 72.54 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|csv:101212844 5 449 + 445 Gaps:35 98.80 415 75.37 0.0 equilibrative nucleotide transporter 3-like
blastp_kegg lcl|pop:POPTR_0004s03240g 4 446 + 443 Gaps:31 97.40 423 77.91 0.0 POPTRDRAFT_817747 equilibrative nucleoside transporter family protein
blastp_kegg lcl|cmo:103484566 5 449 + 445 Gaps:35 91.72 447 74.39 0.0 equilibrative nucleotide transporter 3-like
blastp_uniprot_sprot sp|Q9M0Y3|ENT3_ARATH 6 446 + 441 Gaps:32 97.85 418 72.37 0.0 Equilibrative nucleotide transporter 3 OS Arabidopsis thaliana GN ENT3 PE 1 SV 1
blastp_uniprot_sprot sp|Q944N8|ENT6_ARATH 3 446 + 444 Gaps:33 98.33 418 69.10 0.0 Equilibrative nucleotide transporter 6 OS Arabidopsis thaliana GN ENT6 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0Y1|ENT5_ARATH 6 446 + 441 Gaps:31 97.85 419 68.29 0.0 Equilibrative nucleotide transporter 5 OS Arabidopsis thaliana GN ENT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M0Y2|ENT4_ARATH 6 445 + 440 Gaps:32 97.61 418 65.93 0.0 Equilibrative nucleotide transporter 4 OS Arabidopsis thaliana GN ENT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q944P0|ENT7_ARATH 3 449 + 447 Gaps:30 100.00 417 59.71 4e-175 Equilibrative nucleotide transporter 7 OS Arabidopsis thaliana GN ENT7 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SR64|ENT2_ARATH 11 446 + 436 Gaps:30 97.36 417 59.61 2e-167 Equilibrative nucleotide transporter 2 OS Arabidopsis thaliana GN ENT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q84XI3|ENT8_ARATH 3 444 + 442 Gaps:71 98.46 389 30.81 8e-39 Equilibrative nucleotide transporter 8 OS Arabidopsis thaliana GN ETN8 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VXY7|ENT1_ARATH 26 444 + 419 Gaps:55 84.44 450 29.74 3e-38 Equilibrative nucleotide transporter 1 OS Arabidopsis thaliana GN ENT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q14542|S29A2_HUMAN 143 442 + 300 Gaps:39 72.15 456 20.97 8e-10 Equilibrative nucleoside transporter 2 OS Homo sapiens GN SLC29A2 PE 1 SV 3
blastp_uniprot_sprot sp|A1L272|S29A4_DANRE 168 435 + 268 Gaps:55 58.49 518 23.76 6e-09 Equilibrative nucleoside transporter 4 OS Danio rerio GN slc29a4 PE 2 SV 1
rpsblast_cdd gnl|CDD|162122 25 445 + 421 Gaps:49 98.86 437 22.22 3e-26 TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
rpsblast_cdd gnl|CDD|110711 158 444 + 287 Gaps:33 97.05 305 22.30 7e-18 pfam01733 Nucleoside_tran Nucleoside transporter. This is a family of nucleoside transporters. In mammalian cells nucleoside transporters transport nucleoside across the plasma membrane and are essential for nucleotide synthesis via the salvage pathways for cells that lack their own de novo synthesis pathways. Also in this family is mouse and human nucleolar protein HNP36 a protein of unknown function although it has been hypothesised to be a plasma membrane nucleoside transporter.
rpsblast_kog gnl|CDD|36692 1 445 + 445 Gaps:55 99.51 406 37.13 6e-88 KOG1479 KOG1479 KOG1479 Nucleoside transporter [Nucleotide transport and metabolism].

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 359 378 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 327 347 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 379 383 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 155 442 288 PF01733 "Reactome:REACT_15518","Reactome:REACT_1698" Nucleoside transporter IPR002259
Phobius 215 236 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 132 449 318 PTHR10332 "Reactome:REACT_15518","Reactome:REACT_1698";signature_desc=EQUILIBRATIVE NUCLEOSIDE TRANSPORTER none IPR002259
PANTHER 5 101 97 PTHR10332 "Reactome:REACT_15518","Reactome:REACT_1698";signature_desc=EQUILIBRATIVE NUCLEOSIDE TRANSPORTER none IPR002259
Phobius 45 55 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 348 358 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 142 160 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 296 315 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 204 214 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 86 105 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 161 180 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 106 141 36 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 181 203 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 444 449 6 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 180 441 262 SSF103473 none none IPR020846
Phobius 237 295 59 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 56 74 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 21 44 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 75 85 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 132 449 318 PTHR10332:SF30 none none IPR030200
PANTHER 5 101 97 PTHR10332:SF30 none none IPR030200
Phobius 316 326 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 409 419 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 420 443 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 384 408 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

11 Localization

Analysis Start End Length
TMHMM 87 109 22
TMHMM 387 409 22
TMHMM 19 41 22
TMHMM 56 75 19
TMHMM 177 199 22
TMHMM 142 164 22
TMHMM 326 348 22
TMHMM 214 236 22
TMHMM 360 377 17
TMHMM 422 444 22
TMHMM 289 311 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting