Protein : Qrob_P0685760.2 Q. robur
Protein Identifier  ? Qrob_P0685760.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=2) K11843 - ubiquitin carboxyl-terminal hydrolase 14 [EC:3.1.2.15] Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 201  
Kegg Orthology  K11843
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103500742 31 198 + 168 Gaps:1 34.99 483 75.15 5e-81 ubiquitin carboxyl-terminal hydrolase 6
blastp_kegg lcl|tcc:TCM_028999 30 180 + 151 none 31.26 483 88.74 1e-79 Ubiquitin-specific protease 6
blastp_kegg lcl|pmum:103327733 31 180 + 150 none 31.38 478 89.33 4e-78 ubiquitin carboxyl-terminal hydrolase 6
blastp_kegg lcl|pper:PRUPE_ppa005074mg 31 180 + 150 none 31.51 476 89.33 5e-78 hypothetical protein
blastp_kegg lcl|vvi:100254966 31 180 + 150 Gaps:4 30.48 479 90.41 5e-77 ubiquitin carboxyl-terminal hydrolase 6-like
blastp_kegg lcl|rcu:RCOM_0004440 31 179 + 149 none 30.91 482 89.26 7e-77 Ubiquitin carboxyl-terminal hydrolase putative (EC:3.1.2.15)
blastp_kegg lcl|pop:POPTR_0001s20410g 31 180 + 150 none 29.59 507 89.33 7e-77 UBIQUITIN-SPECIFIC PROTEASE 6 family protein
blastp_kegg lcl|cit:102619927 31 180 + 150 none 30.86 486 85.33 9e-77 ubiquitin carboxyl-terminal hydrolase 6-like
blastp_kegg lcl|cam:101499834 31 180 + 150 none 31.32 479 84.00 8e-75 ubiquitin carboxyl-terminal hydrolase 6-like
blastp_kegg lcl|gmx:100787481 31 180 + 150 none 27.93 537 86.00 3e-74 ubiquitin carboxyl-terminal hydrolase 7-like
blastp_pdb 2ayo_A 33 171 + 139 Gaps:5 35.64 404 41.67 3e-27 mol:protein length:404 Ubiquitin carboxyl-terminal hydrolase 14
blastp_pdb 2ayn_C 33 171 + 139 Gaps:5 35.64 404 41.67 3e-27 mol:protein length:404 Ubiquitin carboxyl-terminal hydrolase 14
blastp_pdb 2ayn_B 33 171 + 139 Gaps:5 35.64 404 41.67 3e-27 mol:protein length:404 Ubiquitin carboxyl-terminal hydrolase 14
blastp_pdb 2ayn_A 33 171 + 139 Gaps:5 35.64 404 41.67 3e-27 mol:protein length:404 Ubiquitin carboxyl-terminal hydrolase 14
blastp_pdb 1vjv_A 44 153 + 110 Gaps:4 25.54 415 47.17 2e-23 mol:protein length:415 Ubiquitin carboxyl-terminal hydrolase 6
blastp_uniprot_sprot sp|Q84WC6|UBP7_ARATH 32 180 + 149 Gaps:1 31.03 477 83.78 8e-73 Ubiquitin carboxyl-terminal hydrolase 7 OS Arabidopsis thaliana GN UBP7 PE 1 SV 1
blastp_uniprot_sprot sp|Q949Y0|UBP6_ARATH 31 182 + 152 Gaps:1 31.33 482 82.12 1e-70 Ubiquitin carboxyl-terminal hydrolase 6 OS Arabidopsis thaliana GN UBP6 PE 1 SV 1
blastp_uniprot_sprot sp|Q0IIF7|UBP14_BOVIN 33 172 + 140 Gaps:5 28.14 494 43.17 1e-27 Ubiquitin carboxyl-terminal hydrolase 14 OS Bos taurus GN USP14 PE 2 SV 3
blastp_uniprot_sprot sp|Q9JMA1|UBP14_MOUSE 33 175 + 143 Gaps:2 29.41 493 40.00 2e-27 Ubiquitin carboxyl-terminal hydrolase 14 OS Mus musculus GN Usp14 PE 1 SV 3
blastp_uniprot_sprot sp|P40826|UBP14_RABIT 33 167 + 135 Gaps:4 28.19 493 43.17 6e-27 Ubiquitin carboxyl-terminal hydrolase 14 OS Oryctolagus cuniculus GN USP14 PE 1 SV 3
blastp_uniprot_sprot sp|P60051|UBP14_PANTR 33 171 + 139 Gaps:5 29.21 493 41.67 2e-26 Ubiquitin carboxyl-terminal hydrolase 14 OS Pan troglodytes GN USP14 PE 3 SV 2
blastp_uniprot_sprot sp|P54578|UBP14_HUMAN 33 171 + 139 Gaps:5 29.15 494 41.67 2e-26 Ubiquitin carboxyl-terminal hydrolase 14 OS Homo sapiens GN USP14 PE 1 SV 3
blastp_uniprot_sprot sp|P43593|UBP6_YEAST 44 153 + 110 Gaps:4 21.24 499 47.17 2e-22 Ubiquitin carboxyl-terminal hydrolase 6 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UBP6 PE 1 SV 1
blastp_uniprot_sprot sp|Q17361|UBP14_CAEEL 33 158 + 126 Gaps:1 25.97 489 40.16 2e-22 Ubiquitin carboxyl-terminal hydrolase 14 OS Caenorhabditis elegans GN usp-14 PE 2 SV 2
blastp_uniprot_sprot sp|Q92353|UBP6_SCHPO 46 154 + 109 none 23.29 468 44.04 6e-22 Ubiquitin carboxyl-terminal hydrolase 6 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ubp6 PE 1 SV 2
rpsblast_cdd gnl|CDD|73063 32 136 + 105 Gaps:3 35.41 305 60.19 2e-35 cd02657 Peptidase_C19A A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates which could rescue them from degradation as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell and with over 50 members family C19 is one of the largest families of peptidases in the human genome..
rpsblast_cdd gnl|CDD|201230 32 142 + 111 Gaps:6 36.74 313 27.83 2e-10 pfam00443 UCH Ubiquitin carboxyl-terminal hydrolase.
rpsblast_cdd gnl|CDD|73062 32 138 + 107 Gaps:8 44.31 255 26.55 2e-08 cd02257 Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates which could rescue them from degradation as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell and with over 50 members family C19 is one of the largest families of peptidases in the human genome..
rpsblast_kog gnl|CDD|37083 33 180 + 148 Gaps:3 31.50 473 38.93 2e-42 KOG1872 KOG1872 KOG1872 Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 37 142 106 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394
PANTHER 35 158 124 PTHR24006 none none none
Phobius 15 18 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 19 200 182 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 32 177 146 SSF54001 none none none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 3 14 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 35 158 124 PTHR24006:SF351 none none none

1 Localization

Analysis Start End Length
TMHMM 4 26 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting