Protein : Qrob_P0680280.2 Q. robur
Protein Identifier  ? Qrob_P0680280.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) 3.2.1.24 - Alpha-mannosidase. Code Enzyme  EC:3.2.1.24
Gene Prediction Quality  validated Protein length 

Sequence

Length: 257  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004559 alpha-mannosidase activity Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_009G161600g 6 250 + 245 Gaps:81 41.92 730 62.09 2e-118 hypothetical protein
blastp_kegg lcl|mtr:MTR_3g098650 25 250 + 226 Gaps:71 29.23 1016 63.30 4e-118 Lysosomal alpha-mannosidase
blastp_kegg lcl|cam:101490825 1 250 + 250 Gaps:80 30.83 1012 61.86 1e-117 lysosomal alpha-mannosidase-like
blastp_kegg lcl|gmx:100798150 6 250 + 245 Gaps:80 30.37 1011 61.89 3e-117 lysosomal alpha-mannosidase-like
blastp_kegg lcl|mdm:103411291 25 256 + 232 Gaps:74 64.10 468 60.33 1e-116 lysosomal alpha-mannosidase-like
blastp_kegg lcl|rcu:RCOM_1503670 11 250 + 240 Gaps:76 30.43 1012 62.34 5e-116 lysosomal alpha-mannosidase putative (EC:3.2.1.24)
blastp_kegg lcl|gmx:100802094 19 250 + 232 Gaps:77 29.94 1012 62.38 7e-116 lysosomal alpha-mannosidase-like
blastp_kegg lcl|pop:POPTR_0012s10830g 21 250 + 230 Gaps:74 29.45 1012 61.07 2e-113 POPTRDRAFT_1095647 hypothetical protein
blastp_kegg lcl|fve:101310406 7 250 + 244 Gaps:75 30.99 1010 59.74 3e-113 lysosomal alpha-mannosidase-like
blastp_kegg lcl|cit:102627684 7 250 + 244 Gaps:82 30.30 1010 60.46 7e-112 lysosomal alpha-mannosidase-like
blastp_pdb 1o7d_A 31 249 + 219 Gaps:72 96.98 298 35.64 1e-52 mol:protein length:298 LYSOSOMAL ALPHA-MANNOSIDASE
blastp_pdb 3czs_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3czn_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3cv5_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3bvx_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3bvw_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3bvv_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3bvu_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3bvt_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_pdb 3buq_A 29 157 + 129 Gaps:20 14.26 1045 34.23 7e-20 mol:protein length:1045 Alpha-mannosidase 2
blastp_uniprot_sprot sp|P34098|MANA_DICDI 4 249 + 246 Gaps:81 30.59 1010 39.48 2e-56 Lysosomal alpha-mannosidase OS Dictyostelium discoideum GN manA PE 1 SV 2
blastp_uniprot_sprot sp|Q8VHC8|MA2B1_CAVPO 26 249 + 224 Gaps:76 29.20 1007 35.03 5e-50 Lysosomal alpha-mannosidase OS Cavia porcellus GN MAN2B1 PE 1 SV 1
blastp_uniprot_sprot sp|Q60HE9|MA2B1_MACFA 31 249 + 219 Gaps:76 28.56 1012 35.64 6e-49 Lysosomal alpha-mannosidase OS Macaca fascicularis GN MAN2B1 PE 2 SV 1
blastp_uniprot_sprot sp|Q29451|MA2B1_BOVIN 31 249 + 219 Gaps:72 28.93 999 35.64 7e-49 Lysosomal alpha-mannosidase OS Bos taurus GN MAN2B1 PE 1 SV 4
blastp_uniprot_sprot sp|O00754|MA2B1_HUMAN 31 249 + 219 Gaps:76 28.59 1011 35.29 1e-48 Lysosomal alpha-mannosidase OS Homo sapiens GN MAN2B1 PE 1 SV 3
blastp_uniprot_sprot sp|O09159|MA2B1_MOUSE 19 249 + 231 Gaps:70 29.71 1013 33.55 1e-46 Lysosomal alpha-mannosidase OS Mus musculus GN Man2b1 PE 2 SV 4
blastp_uniprot_sprot sp|O46432|MA2B1_FELCA 31 249 + 219 Gaps:72 28.70 1007 34.26 3e-45 Lysosomal alpha-mannosidase OS Felis catus GN MAN2B1 PE 2 SV 1
blastp_uniprot_sprot sp|Q54KN4|MANF_DICDI 36 249 + 214 Gaps:52 26.76 994 28.20 8e-29 Alpha-mannosidase F OS Dictyostelium discoideum GN manF PE 3 SV 1
blastp_uniprot_sprot sp|Q55ER0|MANC_DICDI 42 249 + 208 Gaps:81 26.78 1079 30.10 5e-28 Alpha-mannosidase C OS Dictyostelium discoideum GN manC PE 3 SV 1
blastp_uniprot_sprot sp|Q54YF7|MANB_DICDI 42 162 + 121 Gaps:20 13.62 1035 41.13 7e-27 Alpha-mannosidase B OS Dictyostelium discoideum GN manB PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 14 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 160 251 92 G3DSA:3.20.110.10 none none IPR027291
Pfam 72 157 86 PF01074 none Glycosyl hydrolases family 38 N-terminal domain IPR000602
Pfam 43 71 29 PF01074 none Glycosyl hydrolases family 38 N-terminal domain IPR000602
Gene3D 72 157 86 G3DSA:3.20.110.10 none none IPR027291
Gene3D 26 67 42 G3DSA:3.20.110.10 none none IPR027291
PANTHER 1 250 250 PTHR11607:SF18 none none none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 250 250 PTHR11607 none none none
Phobius 15 18 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 19 256 238 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 31 250 220 SSF88713 none none IPR011330

1 Localization

Analysis Start End Length
SignalP_EUK 1 26 25

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting