Protein : Qrob_P0676600.2 Q. robur
Protein Identifier  ? Qrob_P0676600.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG1687//KOG1713 - NADH-ubiquinone oxidoreductase NUFS7/PSST/20 kDa subunit [Energy production and conversion]. // NADH-ubiquinone oxidoreductase NDUFS3/30 kDa subunit [Energy production and conversion]. Code Enzyme  EC:1.6.99.3, EC:1.6.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 400  
Kegg Orthology  K05582
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016651 oxidoreductase activity, acting on NAD(P)H Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0048038 quinone binding Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
GO:0051539 4 iron, 4 sulfur cluster binding Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
GO:0008137 NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|atr:s00334p00014280 17 399 + 383 Gaps:47 96.00 350 88.99 0.0 AMTR_s00334p00014280 hypothetical protein
blastp_kegg lcl|vvi:4025142 17 229 + 213 Gaps:3 93.33 225 90.95 8e-132 ndhK ViviCp025 NADH dehydrogenase 27 kDa subunit
blastp_kegg lcl|fve:10251521 17 229 + 213 Gaps:3 92.92 226 90.95 7e-131 ndhK FvH4_C0043 NADH-plastoquinone oxidoreductase subunit K
blastp_kegg lcl|pop:Poptr_cp026 5 229 + 225 Gaps:7 96.89 225 87.61 1e-128 ndhK NADH dehydrogenase subunit K (EC:1.6.5.3)
blastp_kegg lcl|tcc:ThcaC_p024 17 229 + 213 Gaps:3 93.33 225 89.52 6e-128 ndhK NADH-plastoquinone oxidoreductase subunit K
blastp_kegg lcl|pmum:18668033 17 229 + 213 Gaps:3 92.92 226 89.52 2e-127 ndhK CP95_p063 NADH-plastoquinone oxidoreductase subunit K
blastp_kegg lcl|pper:PrpeC_p025 17 229 + 213 Gaps:3 92.92 226 89.52 2e-127 ndhK NADH-plastoquinone oxidoreductase subunit K
blastp_kegg lcl|sot:4099978 5 229 + 225 Gaps:7 76.76 284 86.24 4e-126 ndhK SotuCp025 NADH dehydrogenase 27 kDa subunit
blastp_kegg lcl|sly:3950396 5 229 + 225 Gaps:7 76.76 284 86.24 4e-126 ndhK LyesC2p065 NADH-plastoquinone oxidoreductase subunit K
blastp_kegg lcl|sly:101260256 5 229 + 225 Gaps:7 76.76 284 86.24 4e-126 ndhK NAD(P)H-quinone oxidoreductase subunit K chloroplastic-like
blastp_pdb 3m9s_F 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit B
blastp_pdb 3m9s_6 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit B
blastp_pdb 3ias_X 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3ias_O 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3ias_F 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3ias_6 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3iam_F 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3iam_6 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3i9v_F 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_pdb 3i9v_6 16 168 + 153 Gaps:3 83.98 181 46.05 6e-44 mol:protein length:181 NADH-quinone oxidoreductase subunit 6
blastp_uniprot_sprot sp|Q0ZJ16|NDHK_VITVI 17 229 + 213 Gaps:3 93.33 225 90.95 3e-133 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Vitis vinifera GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|A8SEA7|NDHK_CERDE 17 229 + 213 Gaps:2 93.42 228 90.14 5e-131 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Ceratophyllum demersum GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|B1A939|NDHK_CARPA 17 229 + 213 Gaps:3 93.33 225 90.00 4e-130 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Carica papaya GN ndhK PE 3 SV 1
blastp_uniprot_sprot sp|A4GYR4|NDHK_POPTR 5 229 + 225 Gaps:7 96.89 225 87.61 4e-130 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Populus trichocarpa GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|Q09G42|NDHK_PLAOC 17 229 + 213 Gaps:3 93.33 225 90.48 7e-130 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Platanus occidentalis GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|Q09X13|NDHK_MORIN 17 229 + 213 Gaps:3 92.92 226 89.05 1e-129 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Morus indica GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|Q68S02|NDHK_PANGI 17 229 + 213 Gaps:3 93.33 225 89.05 1e-129 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Panax ginseng GN ndhK PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9L5|NDHK_LIRTU 17 229 + 213 Gaps:3 93.33 225 89.52 1e-129 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Liriodendron tulipifera GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|Q8S8X1|NDHK_ATRBE 17 229 + 213 Gaps:3 93.33 225 88.57 2e-129 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Atropa belladonna GN ndhK PE 3 SV 2
blastp_uniprot_sprot sp|A6MMU8|NDHK_ILLOL 17 229 + 213 Gaps:3 93.33 225 89.05 2e-129 NAD(P)H-quinone oxidoreductase subunit K chloroplastic OS Illicium oligandrum GN ndhK PE 3 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 30 163 134 G3DSA:3.40.50.700 none none IPR006137
Pfam 51 156 106 PF01058 none NADH ubiquinone oxidoreductase, 20 Kd subunit IPR006137
ProSitePatterns 352 373 22 PS00542 none Respiratory chain NADH dehydrogenase 30 Kd subunit signature. IPR020396
ProDom 325 380 56 PD001581 none OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 IPR001268
Hamap 242 399 158 MF_01357 none NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. IPR010218
PANTHER 17 245 229 PTHR11995 none none none
SUPERFAMILY 247 395 149 SSF143243 none none none
Pfam 283 385 103 PF00329 none Respiratory-chain NADH dehydrogenase, 30 Kd subunit IPR001268
PANTHER 17 245 229 PTHR11995:SF10 none none none
TIGRFAM 20 162 143 TIGR01957 none nuoB_fam: NADH-quinone oxidoreductase, B subunit IPR006138
ProSitePatterns 128 144 17 PS01150 none Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. IPR006138
SUPERFAMILY 19 168 150 SSF56770 none none none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting