Protein : Qrob_P0666650.2 Q. robur
Protein Identifier  ? Qrob_P0666650.2 Organism . Name  Quercus robur
Protein Description  (M=9) 2.4.2.1 - Purine-nucleoside phosphorylase. Alias (in v1)  Qrob_P0833710.1
Code Enzyme  EC:2.4.2.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 450  
Kegg Orthology  K07375
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0007017 microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0043234 protein complex A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
GO:0051258 protein polymerization The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.
GO:0005874 microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO:0005200 structural constituent of cytoskeleton The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103440256 1 449 + 449 none 100.00 449 97.55 0.0 tubulin beta chain
blastp_kegg lcl|fve:101305819 1 449 + 449 none 100.00 449 97.55 0.0 tubulin beta-1 chain-like
blastp_kegg lcl|pmum:103321244 1 449 + 449 none 100.00 449 97.10 0.0 tubulin beta chain-like
blastp_kegg lcl|mdm:103430391 1 449 + 449 none 100.00 449 97.10 0.0 tubulin beta chain
blastp_kegg lcl|pper:PRUPE_ppa005644mg 1 449 + 449 Gaps:1 100.00 450 97.11 0.0 hypothetical protein
blastp_kegg lcl|vvi:100259087 1 448 + 448 Gaps:1 99.78 448 97.32 0.0 tubulin beta-1 chain-like
blastp_kegg lcl|cit:102631140 1 448 + 448 Gaps:1 99.78 448 97.32 0.0 tubulin beta-6 chain-like
blastp_kegg lcl|cic:CICLE_v10001140mg 1 448 + 448 Gaps:1 99.78 448 97.09 0.0 hypothetical protein
blastp_kegg lcl|pxb:103927774 1 449 + 449 none 100.00 449 96.44 0.0 tubulin beta chain-like
blastp_kegg lcl|rcu:RCOM_1598040 1 448 + 448 Gaps:1 99.78 448 96.87 0.0 tubulin beta chain putative
blastp_pdb 1z2b_D 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 1z2b_B 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2k_D 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2k_B 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2g_D 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3n2g_B 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hke_D 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hke_B 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hkd_D 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_pdb 3hkd_B 1 432 + 432 Gaps:2 96.63 445 87.21 0.0 mol:protein length:445 Tubulin beta chain
blastp_uniprot_sprot sp|Q9ZPP0|TBB1_ELEIN 1 441 + 441 Gaps:2 98.65 445 96.58 0.0 Tubulin beta-1 chain OS Eleusine indica GN TUBB1 PE 2 SV 1
blastp_uniprot_sprot sp|P18025|TBB1_MAIZE 1 432 + 432 Gaps:2 96.41 446 95.12 0.0 Tubulin beta-1 chain OS Zea mays GN TUBB1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZPN9|TBB2_ELEIN 1 441 + 441 Gaps:2 97.99 448 95.44 0.0 Tubulin beta-2 chain OS Eleusine indica GN TUBB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VAF6|TBB6_GOSHI 1 432 + 432 none 96.00 450 96.06 0.0 Tubulin beta-6 chain OS Gossypium hirsutum PE 2 SV 1
blastp_uniprot_sprot sp|P12411|TBB1_ARATH 1 432 + 432 Gaps:1 96.42 447 96.75 0.0 Tubulin beta-1 chain OS Arabidopsis thaliana GN TUBB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VAF7|TBB5_GOSHI 1 434 + 434 Gaps:2 97.08 445 96.76 0.0 Tubulin beta-5 chain OS Gossypium hirsutum PE 2 SV 1
blastp_uniprot_sprot sp|Q40665|TBB3_ORYSJ 1 432 + 432 Gaps:2 96.41 446 96.98 0.0 Tubulin beta-3 chain OS Oryza sativa subsp. japonica GN TUBB3 PE 1 SV 2
blastp_uniprot_sprot sp|P29513|TBB5_ARATH 1 432 + 432 Gaps:1 95.99 449 96.75 0.0 Tubulin beta-5 chain OS Arabidopsis thaliana GN TUBB5 PE 2 SV 1
blastp_uniprot_sprot sp|P46264|TBB2_SOLTU 1 431 + 431 Gaps:1 95.58 452 96.30 0.0 Tubulin beta-2 chain OS Solanum tuberosum GN TUBB2 PE 2 SV 1
blastp_uniprot_sprot sp|P46263|TBB1_SOLTU 1 431 + 431 Gaps:1 95.79 451 96.30 0.0 Tubulin beta-1 chain OS Solanum tuberosum GN TUBB1 PE 2 SV 1

36 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 3 224 222 PF00091 none Tubulin/FtsZ family, GTPase domain IPR003008
PRINTS 53 72 20 PR01161 none Tubulin signature IPR000217
PRINTS 372 400 29 PR01161 none Tubulin signature IPR000217
PRINTS 192 212 21 PR01161 none Tubulin signature IPR000217
PRINTS 95 106 12 PR01161 none Tubulin signature IPR000217
PRINTS 10 30 21 PR01161 none Tubulin signature IPR000217
PRINTS 178 191 14 PR01161 none Tubulin signature IPR000217
PRINTS 153 174 22 PR01161 none Tubulin signature IPR000217
PRINTS 108 132 25 PR01161 none Tubulin signature IPR000217
PRINTS 134 152 19 PR01161 none Tubulin signature IPR000217
SUPERFAMILY 246 431 186 SSF55307 none none IPR008280
PRINTS 43 60 18 PR01163 none Beta-tubulin signature IPR002453
PRINTS 331 345 15 PR01163 none Beta-tubulin signature IPR002453
PRINTS 214 226 13 PR01163 none Beta-tubulin signature IPR002453
PRINTS 154 166 13 PR01163 none Beta-tubulin signature IPR002453
PRINTS 90 101 12 PR01163 none Beta-tubulin signature IPR002453
PRINTS 267 283 17 PR01163 none Beta-tubulin signature IPR002453
PRINTS 379 390 12 PR01163 none Beta-tubulin signature IPR002453
PRINTS 414 432 19 PR01163 none Beta-tubulin signature IPR002453
PRINTS 110 128 19 PR01163 none Beta-tubulin signature IPR002453
PRINTS 232 241 10 PR01163 none Beta-tubulin signature IPR002453
PRINTS 247 260 14 PR01163 none Beta-tubulin signature IPR002453
PRINTS 313 331 19 PR01163 none Beta-tubulin signature IPR002453
PRINTS 349 372 24 PR01163 none Beta-tubulin signature IPR002453
PANTHER 1 441 441 PTHR11588 none none IPR000217
ProSitePatterns 142 148 7 PS00227 none Tubulin subunits alpha, beta, and gamma signature. IPR017975
Coils 410 431 22 Coil none none none
PANTHER 1 441 441 PTHR11588:SF66 none none none
ProSitePatterns 1 4 4 PS00228 "Reactome:REACT_152" Tubulin-beta mRNA autoregulation signal. IPR013838
Gene3D 1 265 265 G3DSA:3.40.50.1440 none none IPR003008

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting