Protein : Qrob_P0657180.2 Q. robur
Protein Identifier  ? Qrob_P0657180.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 (PTHR10641:SF457) Alias (in v1)  Qrob_P0213240.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 358  
Kegg Orthology  K09422
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006351 transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
GO:0010338 leaf formation The process that gives rise to a leaf. This process pertains to the initial formation of a structure from unspecified parts.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021932 1 357 + 357 none 100.00 357 85.71 0.0 Myb-like HTH transcriptional regulator family protein isoform 1
blastp_kegg lcl|pop:POPTR_0006s08610g 1 357 + 357 Gaps:12 100.00 369 83.74 0.0 POPTRDRAFT_652976 Myb-related protein 91
blastp_kegg lcl|pper:PRUPE_ppa007753mg 1 357 + 357 Gaps:3 99.44 356 86.16 0.0 hypothetical protein
blastp_kegg lcl|pmum:103339392 1 357 + 357 Gaps:3 98.33 360 85.88 0.0 transcription factor AS1
blastp_kegg lcl|rcu:RCOM_0283740 1 348 + 348 none 99.71 349 84.20 0.0 asymmetric leaves1 and rough sheath putative
blastp_kegg lcl|vvi:100256209 1 357 + 357 Gaps:1 100.00 358 86.59 0.0 transcription factor AS1-like
blastp_kegg lcl|cic:CICLE_v10012089mg 1 357 + 357 Gaps:7 100.00 350 84.00 0.0 hypothetical protein
blastp_kegg lcl|cit:102619220 1 357 + 357 Gaps:7 100.00 350 84.00 0.0 transcription factor AS1-like
blastp_kegg lcl|pxb:103933794 1 357 + 357 Gaps:4 100.00 353 84.70 0.0 transcription factor AS1
blastp_kegg lcl|mdm:103433420 1 357 + 357 Gaps:4 100.00 353 83.57 0.0 transcription factor AS1
blastp_pdb 1msf_C 7 100 + 94 Gaps:3 86.67 105 39.56 1e-15 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1mse_C 7 100 + 94 Gaps:3 86.67 105 39.56 1e-15 mol:protein length:105 C-Myb DNA-Binding Domain
blastp_pdb 1gv2_A 7 100 + 94 Gaps:3 86.67 105 39.56 1e-15 mol:protein length:105 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1a5j_A 7 92 + 86 Gaps:3 75.45 110 43.37 2e-15 mol:protein length:110 B-MYB
blastp_pdb 1h8a_C 7 100 + 94 Gaps:3 71.09 128 39.56 3e-15 mol:protein length:128 MYB TRANSFORMING PROTEIN
blastp_pdb 1h89_C 4 100 + 97 Gaps:7 91.82 159 43.84 4e-15 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 1h88_C 4 100 + 97 Gaps:7 91.82 159 43.84 4e-15 mol:protein length:159 MYB PROTO-ONCOGENE PROTEIN
blastp_pdb 3zqc_J 11 100 + 90 Gaps:5 66.41 131 43.68 2e-13 mol:protein length:131 MYB3
blastp_pdb 3zqc_G 11 100 + 90 Gaps:5 66.41 131 43.68 2e-13 mol:protein length:131 MYB3
blastp_pdb 3zqc_D 11 100 + 90 Gaps:5 66.41 131 43.68 2e-13 mol:protein length:131 MYB3
blastp_uniprot_sprot sp|O80931|AS1_ARATH 1 348 + 348 Gaps:25 98.91 367 74.10 8e-173 Transcription factor AS1 OS Arabidopsis thaliana GN AS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q94IB1|RS2_ORYSJ 1 348 + 348 Gaps:50 92.98 342 65.41 3e-121 Protein rough sheath 2 homolog OS Oryza sativa subsp. japonica GN RS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7B2|RS2_MAIZE 1 346 + 346 Gaps:28 96.22 370 59.55 8e-113 Protein rough sheath 2 OS Zea mays GN RS2 PE 1 SV 1
blastp_uniprot_sprot sp|A2WW87|GAM1_ORYSI 7 109 + 103 Gaps:2 18.26 553 48.51 2e-23 Transcription factor GAMYB OS Oryza sativa subsp. indica GN GAM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JIC2|GAM1_ORYSJ 7 109 + 103 Gaps:2 18.26 553 48.51 2e-23 Transcription factor GAMYB OS Oryza sativa subsp. japonica GN GAM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4JL84|MYB59_ARATH 7 112 + 106 Gaps:2 44.26 235 45.19 1e-22 Transcription factor MYB59 OS Arabidopsis thaliana GN MYB59 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LX82|MYB48_ARATH 7 112 + 106 Gaps:2 40.62 256 44.23 2e-22 Transcription factor MYB48 OS Arabidopsis thaliana GN MYB48 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LTF7|MYB82_ARATH 3 114 + 112 Gaps:2 54.73 201 40.91 5e-22 Transcription factor MYB82 OS Arabidopsis thaliana GN MYB82 PE 1 SV 1
blastp_uniprot_sprot sp|P81392|MYB06_ANTMA 7 115 + 109 Gaps:3 34.18 316 42.59 2e-21 Myb-related protein 306 OS Antirrhinum majus GN MYB306 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSA1|MYB57_ARATH 7 114 + 108 Gaps:2 51.46 206 42.45 3e-21 Transcription factor MYB57 OS Arabidopsis thaliana GN MYB57 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 6 60 55 G3DSA:1.10.10.60 none none IPR009057
SMART 58 106 49 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 3 55 53 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
Coils 306 327 22 Coil none none none
SUPERFAMILY 4 98 95 SSF46689 none none IPR009057
Gene3D 61 102 42 G3DSA:1.10.10.60 none none IPR009057
Coils 284 305 22 Coil none none none
PANTHER 1 126 126 PTHR10641 none none none
PANTHER 154 321 168 PTHR10641 none none none
Pfam 7 68 62 PF13921 none Myb-like DNA-binding domain none
PANTHER 1 126 126 PTHR10641:SF457 none none IPR031055
PANTHER 154 321 168 PTHR10641:SF457 none none IPR031055
ProSiteProfiles 1 53 53 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930
ProSiteProfiles 54 108 55 PS51294 none Myb-type HTH DNA-binding domain profile. IPR017930

0 Localization

0 Qtllist

0 Targeting