Protein : Qrob_P0654050.2 Q. robur
Protein Identifier  ? Qrob_P0654050.2 Organism . Name  Quercus robur
Score  50.1 Score Type  egn
Protein Description  (M=2) KOG0238//KOG2835 - 3-Methylcrotonyl-CoA carboxylase biotin-containing subunit/Propionyl-CoA carboxylase alpha chain/Acetyl-CoA carboxylase biotin carboxylase subunit [Lipid transport and metabolism Amino acid transport and metabolism]. // Phosphoribosylamidoimidazole-succinocarboxamide synthase [Nucleotide transport and metabolism]. Code Enzyme  EC:4.1.1.21
Gene Prediction Quality  validated Protein length 

Sequence

Length: 547  
Kegg Orthology  K11808
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0006189 'de novo' IMP biosynthetic process The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
GO:0004638 phosphoribosylaminoimidazole carboxylase activity Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H(+) = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO(2).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0019s02430g 12 532 + 521 Gaps:8 83.44 634 83.74 0.0 Phosphoribosylaminoimidazole carboxylase family protein
blastp_kegg lcl|tcc:TCM_026264 12 532 + 521 Gaps:9 81.16 653 83.96 0.0 Phosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
blastp_kegg lcl|pper:PRUPE_ppa002748mg 7 532 + 526 Gaps:12 84.33 638 81.78 0.0 hypothetical protein
blastp_kegg lcl|mdm:103451046 21 532 + 512 Gaps:7 80.40 643 83.37 0.0 phosphoribosylaminoimidazole carboxylase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0607690 16 532 + 517 Gaps:8 83.15 629 82.41 0.0 phosphoribosylaminoimidazole carboxylase atpase-subunit putative (EC:4.1.1.21)
blastp_kegg lcl|pop:POPTR_0013s04070g 19 532 + 514 Gaps:6 81.25 640 82.50 0.0 POPTRDRAFT_834540 Phosphoribosylaminoimidazole carboxylase family protein
blastp_kegg lcl|pxb:103954378 12 532 + 521 Gaps:12 82.58 643 81.92 0.0 phosphoribosylaminoimidazole carboxylase chloroplastic-like
blastp_kegg lcl|pxb:103961338 21 532 + 512 Gaps:7 80.53 642 82.79 0.0 phosphoribosylaminoimidazole carboxylase chloroplastic-like
blastp_kegg lcl|mdm:103434186 6 532 + 527 Gaps:14 84.22 640 80.33 0.0 phosphoribosylaminoimidazole carboxylase chloroplastic-like
blastp_kegg lcl|vvi:100250122 17 532 + 516 Gaps:9 82.81 634 83.24 0.0 phosphoribosylaminoimidazole carboxylase chloroplastic-like
blastp_pdb 3ax6_D 63 432 + 370 Gaps:24 96.32 380 43.72 5e-93 mol:protein length:380 Phosphoribosylaminoimidazole carboxylase ATP
blastp_pdb 3ax6_C 63 432 + 370 Gaps:24 96.32 380 43.72 5e-93 mol:protein length:380 Phosphoribosylaminoimidazole carboxylase ATP
blastp_pdb 3ax6_B 63 432 + 370 Gaps:24 96.32 380 43.72 5e-93 mol:protein length:380 Phosphoribosylaminoimidazole carboxylase ATP
blastp_pdb 3ax6_A 63 432 + 370 Gaps:24 96.32 380 43.72 5e-93 mol:protein length:380 Phosphoribosylaminoimidazole carboxylase ATP
blastp_pdb 3k5i_D 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_pdb 3k5i_C 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_pdb 3k5i_B 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_pdb 3k5i_A 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_pdb 3k5h_D 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_pdb 3k5h_C 62 423 + 362 Gaps:15 89.08 403 44.85 1e-90 mol:protein length:403 Phosphoribosyl-aminoimidazole carboxylase
blastp_uniprot_sprot sp|P55195|PUR6_VIGAC 62 532 + 471 Gaps:10 85.28 557 74.11 0.0 Phosphoribosylaminoimidazole carboxylase chloroplastic (Fragment) OS Vigna aconitifolia GN PURKE PE 2 SV 1
blastp_uniprot_sprot sp|P15567|PUR6_SCHPO 51 532 + 482 Gaps:27 87.50 552 53.00 4e-164 Phosphoribosylaminoimidazole carboxylase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ade6 PE 3 SV 1
blastp_uniprot_sprot sp|P50504|PUR6_SCHOC 51 532 + 482 Gaps:25 88.15 557 51.53 7e-160 Phosphoribosylaminoimidazole carboxylase OS Schwanniomyces occidentalis GN ADE2 PE 3 SV 1
blastp_uniprot_sprot sp|Q92210|PUR6_CANAL 52 532 + 481 Gaps:33 86.97 568 50.81 7e-152 Phosphoribosylaminoimidazole carboxylase OS Candida albicans (strain SC5314 / ATCC MYA-2876) GN ADE2 PE 3 SV 2
blastp_uniprot_sprot sp|Q01930|PUR6_OGAME 52 532 + 481 Gaps:32 91.90 543 49.30 3e-151 Phosphoribosylaminoimidazole carboxylase OS Ogataea methanolica GN ADE1 PE 3 SV 1
blastp_uniprot_sprot sp|P21264|PUR6_YEAST 52 532 + 481 Gaps:33 87.57 571 47.60 7e-149 Phosphoribosylaminoimidazole carboxylase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ADE2 PE 1 SV 1
blastp_uniprot_sprot sp|O74197|PUR6_CANGA 52 532 + 481 Gaps:32 87.54 570 46.69 7e-145 Phosphoribosylaminoimidazole carboxylase OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN ADE2 PE 3 SV 2
blastp_uniprot_sprot sp|P0C017|PUR6_CRYNH 52 532 + 481 Gaps:37 87.29 582 47.24 6e-142 Phosphoribosylaminoimidazole carboxylase OS Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN ADE2 PE 2 SV 1
blastp_uniprot_sprot sp|P0CQ37|PUR6_CRYNB 52 532 + 481 Gaps:37 87.29 582 46.85 3e-140 Phosphoribosylaminoimidazole carboxylase OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN ADE2 PE 3 SV 1
blastp_uniprot_sprot sp|P0CQ36|PUR6_CRYNJ 52 532 + 481 Gaps:37 87.29 582 46.85 1e-139 Phosphoribosylaminoimidazole carboxylase OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN ADE2 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 437 532 96 SSF52255 none none IPR000031
Pfam 158 328 171 PF02222 "UniPathway:UPA00074" ATP-grasp domain IPR003135
Gene3D 48 156 109 G3DSA:3.40.50.20 none none IPR016185
SUPERFAMILY 52 145 94 SSF52440 none none IPR016185
Pfam 436 532 97 PF00731 none AIR carboxylase IPR000031
PIRSF 46 535 490 PIRSF001340 "KEGG:00230+4.1.1.21","MetaCyc:PWY-6124","UniPathway:UPA00074" none IPR016301
TIGRFAM 52 417 366 TIGR01161 none purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit IPR005875
Hamap 50 412 363 MF_01928 none N5-carboxyaminoimidazole ribonucleotide synthase [purK]. IPR005875
Gene3D 431 532 102 G3DSA:3.40.50.7700 none none IPR000031
PANTHER 5 531 527 PTHR23047 none none none
SUPERFAMILY 354 424 71 SSF51246 none none IPR011054
PANTHER 5 531 527 PTHR23047:SF1 none none none
SUPERFAMILY 148 348 201 SSF56059 none none none
ProSiteProfiles 153 341 189 PS50975 none ATP-grasp fold profile. IPR011761
Gene3D 188 423 236 G3DSA:3.30.470.20 none none IPR013816
SMART 436 543 108 SM01001 none AIR carboxylase IPR000031

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 25 24

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting