Protein : Qrob_P0641890.2 Q. robur
Protein Identifier  ? Qrob_P0641890.2 Organism . Name  Quercus robur
Protein Description  (M=6) K09285 - AP2-like factor, ANT lineage Alias (in v1)  Qrob_P0363410.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 352  
Kegg Orthology  K09285
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100809762 1 320 + 320 Gaps:56 63.41 574 60.16 8e-134 AP2-like ethylene-responsive transcription factor AIL1-like
blastp_kegg lcl|pvu:PHAVU_010G130200g 1 320 + 320 Gaps:64 63.79 580 59.73 4e-133 hypothetical protein
blastp_kegg lcl|tcc:TCM_029127 1 320 + 320 Gaps:87 65.34 580 60.42 3e-130 AP2 domain-containing transcription factor
blastp_kegg lcl|gmx:100805489 1 320 + 320 Gaps:62 63.21 579 59.02 2e-124 AP2-like ethylene-responsive transcription factor AIL1-like
blastp_kegg lcl|pop:POPTR_0003s06330g 1 320 + 320 Gaps:85 67.91 564 57.44 3e-124 POPTRDRAFT_756741 hypothetical protein
blastp_kegg lcl|fve:101297461 1 320 + 320 Gaps:71 65.56 572 58.67 8e-124 AP2-like ethylene-responsive transcription factor AIL1-like
blastp_kegg lcl|rcu:RCOM_0652810 1 320 + 320 Gaps:95 65.74 613 53.35 1e-119 DNA binding protein putative (EC:1.3.1.74)
blastp_kegg lcl|pop:POPTR_0001s16960g 1 320 + 320 Gaps:96 70.55 550 56.19 1e-119 POPTRDRAFT_751450 ovule development family protein
blastp_kegg lcl|pxb:103961568 1 320 + 320 Gaps:71 68.64 558 55.87 3e-119 AP2-like ethylene-responsive transcription factor AIL1
blastp_kegg lcl|vvi:100259954 1 320 + 320 Gaps:86 62.75 561 61.08 1e-116 AP2-like ethylene-responsive transcription factor AIL1-like
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 1 320 + 320 Gaps:102 82.41 415 42.98 1e-61 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 163 320 + 158 Gaps:35 33.33 579 51.81 4e-50 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 3 320 + 318 Gaps:128 58.89 574 47.63 9e-49 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L3U3|BBM1_BRANA 163 320 + 158 Gaps:39 33.33 579 52.33 1e-48 AP2-like ethylene-responsive transcription factor BBM1 OS Brassica napus GN BBM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 200 320 + 121 Gaps:29 25.81 558 63.19 2e-47 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 211 320 + 110 Gaps:26 23.94 568 63.97 7e-47 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ4|BBM_ARATH 163 320 + 158 Gaps:34 32.88 584 51.04 5e-46 AP2-like ethylene-responsive transcription factor BBM OS Arabidopsis thaliana GN BBM PE 2 SV 2
blastp_uniprot_sprot sp|Q38914|ANT_ARATH 189 320 + 132 Gaps:28 28.11 555 57.05 5e-45 AP2-like ethylene-responsive transcription factor ANT OS Arabidopsis thaliana GN ANT PE 1 SV 2
blastp_uniprot_sprot sp|Q52QU2|AIL6_ARATH 198 320 + 123 Gaps:23 25.13 581 58.22 9e-44 AP2-like ethylene-responsive transcription factor AIL6 OS Arabidopsis thaliana GN AIL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q6J9N8|AIL7_ARATH 204 320 + 117 Gaps:26 28.71 498 58.04 2e-42 AP2-like ethylene-responsive transcription factor AIL7 OS Arabidopsis thaliana GN AIL7 PE 2 SV 2
rpsblast_cdd gnl|CDD|197689 227 296 + 70 Gaps:10 100.00 64 45.31 2e-16 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 226 292 + 67 Gaps:6 100.00 61 45.90 5e-13 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 226 282 + 57 Gaps:4 100.00 53 37.74 7e-07 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 226 292 67 SSF54171 none none IPR016177
Gene3D 227 291 65 G3DSA:3.30.730.10 none none IPR001471
SMART 227 296 70 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PRINTS 272 292 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 228 239 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
ProSiteProfiles 227 290 64 PS51032 none AP2/ERF domain profile. IPR001471
Phobius 1 321 321 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 174 309 136 PTHR32467 none none IPR031112
Pfam 226 282 57 PF00847 none AP2 domain IPR001471
PANTHER 174 309 136 PTHR32467:SF5 none none none
Phobius 322 348 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 351 3 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 328 350 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting