Protein : Qrob_P0641810.2 Q. robur
Protein Identifier  ? Qrob_P0641810.2 Organism . Name  Quercus robur
Score  45.0 Score Type  egn
Protein Description  (M=1) KOG0264//KOG0266//KOG0272//KOG0277//KOG0302//KOG0310//KOG1046//KOG1047//KOG4328 - Nucleosome remodeling factor subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]. // WD40 repeat-containing protein [General function prediction only]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Peroxisomal targeting signal type 2 receptor [Intracellular trafficking secretion and vesicular transport]. // Ribosome Assembly protein [General function prediction only]. // Conserved WD40 repeat-containing protein [Function unknown]. // Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism Posttranslational modification protein turnover chaperones]. // Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism Posttranslational modification protein turnover chaperones Defense mechanisms Amino acid transport and metabolism]. // WD40 protein [Function unknown]. Code Enzyme  EC:3.4.11.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 406  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0008237 metallopeptidase activity Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102622839 234 405 + 172 none 32.09 536 65.70 2e-66 WD repeat-containing protein 76-like
blastp_kegg lcl|pmum:103341224 227 405 + 179 Gaps:6 34.91 530 62.16 3e-66 WD repeat-containing protein 76
blastp_kegg lcl|csv:101225617 234 405 + 172 none 33.01 521 65.12 7e-66 WD repeat-containing protein 76-like
blastp_kegg lcl|pper:PRUPE_ppa004099mg 227 405 + 179 Gaps:6 34.91 530 61.62 1e-65 hypothetical protein
blastp_kegg lcl|csv:101202859 234 405 + 172 none 31.56 545 65.12 2e-65 WD repeat-containing protein 76-like
blastp_kegg lcl|cic:CICLE_v10007957mg 234 405 + 172 none 32.09 536 65.12 2e-65 hypothetical protein
blastp_kegg lcl|cmo:103487377 234 405 + 172 none 31.68 543 64.53 2e-65 WD repeat-containing protein 76
blastp_kegg lcl|mdm:103415699 235 405 + 171 Gaps:2 69.26 244 65.09 2e-65 WD repeat-containing protein NCU09302/NCU11420-like
blastp_kegg lcl|pxb:103949112 231 405 + 175 Gaps:2 33.27 520 63.01 2e-63 WD repeat-containing protein 76-like
blastp_kegg lcl|pop:POPTR_0018s12050g 231 405 + 175 none 34.11 513 61.14 9e-63 POPTRDRAFT_578794 hypothetical protein
blastp_pdb 3q7j_B 64 233 + 170 Gaps:27 25.26 780 34.52 2e-21 mol:protein length:780 Tricorn protease-interacting factor F3
blastp_pdb 3q7j_A 64 233 + 170 Gaps:27 25.26 780 34.52 2e-21 mol:protein length:780 Tricorn protease-interacting factor F3
blastp_pdb 1z5h_B 64 233 + 170 Gaps:27 25.26 780 32.99 3e-21 mol:protein length:780 Tricorn protease interacting factor F3
blastp_pdb 1z5h_A 64 233 + 170 Gaps:27 25.26 780 32.99 3e-21 mol:protein length:780 Tricorn protease interacting factor F3
blastp_pdb 1z1w_A 64 233 + 170 Gaps:27 25.26 780 32.99 3e-21 mol:protein length:780 Tricorn protease interacting factor F3
blastp_pdb 2yd0_A 137 234 + 98 Gaps:12 12.26 897 41.82 3e-19 mol:protein length:897 ENDOPLASMIC RETICULUM AMINOPEPTIDASE 1
blastp_pdb 3mdj_C 137 234 + 98 Gaps:12 11.94 921 41.82 4e-19 mol:protein length:921 Endoplasmic reticulum aminopeptidase 1
blastp_pdb 3mdj_B 137 234 + 98 Gaps:12 11.94 921 41.82 4e-19 mol:protein length:921 Endoplasmic reticulum aminopeptidase 1
blastp_pdb 3mdj_A 137 234 + 98 Gaps:12 11.94 921 41.82 4e-19 mol:protein length:921 Endoplasmic reticulum aminopeptidase 1
blastp_pdb 3qnf_C 137 234 + 98 Gaps:12 11.53 954 41.82 4e-19 mol:protein length:954 Endoplasmic reticulum aminopeptidase 1
blastp_uniprot_sprot sp|Q8VZH2|APM1_ARATH 131 247 + 117 Gaps:17 15.24 879 50.75 1e-33 Aminopeptidase M1 OS Arabidopsis thaliana GN APM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6K4E7|APM1D_ORYSJ 141 247 + 107 Gaps:13 13.75 873 53.33 3e-31 Aminopeptidase M1-D OS Oryza sativa subsp. japonica GN Os09g0362800 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J5V5|APM1B_ORYSJ 141 247 + 107 Gaps:13 13.71 875 53.33 6e-31 Aminopeptidase M1-B OS Oryza sativa subsp. japonica GN Os08g0398700 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J2B5|APM1C_ORYSJ 141 247 + 107 Gaps:13 13.67 878 51.67 2e-30 Aminopeptidase M1-C OS Oryza sativa subsp. japonica GN Os09g0362500 PE 2 SV 2
blastp_uniprot_sprot sp|Q6Z6L4|APM1A_ORYSJ 131 246 + 116 Gaps:17 15.15 878 47.37 3e-30 Aminopeptidase M1-A OS Oryza sativa subsp. japonica GN Os02g0218200 PE 2 SV 1
blastp_uniprot_sprot sp|Q11011|PSA_MOUSE 141 234 + 94 Gaps:13 11.63 920 47.66 3e-23 Puromycin-sensitive aminopeptidase OS Mus musculus GN Npepps PE 1 SV 2
blastp_uniprot_sprot sp|P55786|PSA_HUMAN 141 234 + 94 Gaps:13 11.64 919 47.66 3e-23 Puromycin-sensitive aminopeptidase OS Homo sapiens GN NPEPPS PE 1 SV 2
blastp_uniprot_sprot sp|A6NEC2|PSAL_HUMAN 141 234 + 94 Gaps:13 22.38 478 46.73 1e-22 Puromycin-sensitive aminopeptidase-like protein OS Homo sapiens GN NPEPPSL1 PE 2 SV 3
blastp_uniprot_sprot sp|P32454|APE2_YEAST 144 234 + 91 Gaps:13 10.92 952 46.15 3e-21 Aminopeptidase 2 mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN APE2 PE 1 SV 4
blastp_uniprot_sprot sp|O93655|TRF3_THEAC 64 233 + 170 Gaps:27 25.26 780 32.99 1e-20 Tricorn protease-interacting factor F3 OS Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN trf3 PE 1 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 322 336 15 PS00678 none Trp-Asp (WD) repeats signature. IPR019775
SUPERFAMILY 237 397 161 SSF50978 none none IPR017986
PRINTS 163 175 13 PR00756 none Membrane alanyl dipeptidase (M1) family signature IPR014782
PRINTS 144 159 16 PR00756 none Membrane alanyl dipeptidase (M1) family signature IPR014782
Phobius 185 405 221 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 297 335 39 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 351 379 29 PF00400 none WD domain, G-beta repeat IPR001680
Phobius 155 165 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 166 184 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 259 390 132 PS50294 none Trp-Asp (WD) repeats circular profile. IPR017986
ProSiteProfiles 302 338 37 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
SUPERFAMILY 99 234 136 SSF55486 none none none
SMART 295 335 41 SM00320 none WD40 repeats IPR001680
SMART 343 381 39 SM00320 none WD40 repeats IPR001680
Phobius 1 135 135 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 145 223 79 PF01433 none Peptidase family M1 IPR014782
PANTHER 236 405 170 PTHR14773 none none none
Gene3D 239 392 154 G3DSA:2.130.10.10 none none IPR015943
Gene3D 157 236 80 G3DSA:1.10.390.10 none none none
Phobius 136 154 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting