Protein : Qrob_P0641520.2 Q. robur
Protein Identifier  ? Qrob_P0641520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 2.5.1.115 - Homogentisate phytyltransferase. Code Enzyme  EC:2.5.1.115
Gene Prediction Quality  validated Protein length 

Sequence

Length: 378  
Kegg Orthology  K09833
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0004659 prenyltransferase activity Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103453838 1 377 + 377 Gaps:60 100.00 407 70.76 0.0 homogentisate phytyltransferase 1 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa006544mg 1 377 + 377 Gaps:59 100.00 406 69.95 0.0 hypothetical protein
blastp_kegg lcl|mdm:103453843 1 377 + 377 Gaps:60 100.00 407 68.80 0.0 homogentisate phytyltransferase 1 chloroplastic-like
blastp_kegg lcl|pmum:103323537 1 377 + 377 Gaps:59 100.00 406 69.21 0.0 homogentisate phytyltransferase 1 chloroplastic
blastp_kegg lcl|pxb:103934858 1 377 + 377 Gaps:63 100.00 404 69.55 0.0 homogentisate phytyltransferase 1 chloroplastic
blastp_kegg lcl|vvi:100232967 1 377 + 377 Gaps:67 100.00 406 68.72 0.0 HGGT homogentisate geranylgeranyl transferase
blastp_kegg lcl|fve:101307294 1 377 + 377 Gaps:65 100.00 408 69.12 0.0 homogentisate phytyltransferase 1 chloroplastic-like
blastp_kegg lcl|cit:102614532 4 377 + 374 Gaps:47 93.67 411 67.27 2e-173 homogentisate phytyltransferase 1 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0640480 1 367 + 367 Gaps:52 93.29 432 64.02 1e-172 bacteriochlorophyll synthase putative
blastp_kegg lcl|tcc:TCM_039134 12 377 + 366 Gaps:45 91.95 410 67.90 9e-171 Homogentisate geranylgeranyl transferase isoform 1
blastp_uniprot_sprot sp|Q8VWJ1|HPT1_ARATH 39 377 + 339 Gaps:50 87.79 393 67.54 1e-157 Homogentisate phytyltransferase 1 chloroplastic OS Arabidopsis thaliana GN VTE2-1 PE 2 SV 1
blastp_uniprot_sprot sp|B7FA90|HPT1_ORYSJ 69 377 + 309 Gaps:43 79.70 404 71.43 9e-153 Probable homogentisate phytyltransferase 1 chloroplastic OS Oryza sativa subsp. japonica GN HPT1 PE 2 SV 1
blastp_uniprot_sprot sp|B1B3P3|N8DT1_SOPFL 1 377 + 377 Gaps:65 100.00 410 47.80 2e-110 Naringenin 8-dimethylallyltransferase 1 chloroplastic OS Sophora flavescens GN N8DT-1 PE 1 SV 1
blastp_uniprot_sprot sp|B1B5P4|N8DT2_SOPFL 31 377 + 347 Gaps:45 87.96 407 51.12 2e-110 Naringenin 8-dimethylallyltransferase 2 chloroplastic OS Sophora flavescens GN N8DT-2 PE 1 SV 1
blastp_uniprot_sprot sp|B9A1Q4|G4DT_SOYBN 57 377 + 321 Gaps:43 81.66 409 49.40 8e-98 Glycinol 4-dimethylallyltransferase OS Glycine max GN G4DT PE 1 SV 1
blastp_uniprot_sprot sp|Q1ACB3|HPT2_ARATH 53 376 + 324 Gaps:60 86.01 386 33.43 9e-33 Homogentisate phytyltransferase 2 chloroplastic OS Arabidopsis thaliana GN HPT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0D576|HPT2_ORYSJ 76 376 + 301 Gaps:55 82.85 379 30.25 5e-28 Probable homogentisate phytyltransferase 2 chloroplastic OS Oryza sativa subsp. japonica GN HPT2 PE 3 SV 2
rpsblast_cdd gnl|CDD|178466 126 377 + 252 Gaps:28 100.00 280 72.14 1e-126 PLN02878 PLN02878 homogentisate phytyltransferase.
rpsblast_cdd gnl|CDD|183813 96 375 + 280 Gaps:46 94.16 308 41.38 3e-65 PRK12887 ubiA tocopherol phytyltransferase Reviewed.
rpsblast_cdd gnl|CDD|201568 126 368 + 243 Gaps:46 99.23 259 24.12 1e-13 pfam01040 UbiA UbiA prenyltransferase family.
rpsblast_cdd gnl|CDD|30731 85 375 + 291 Gaps:51 98.96 289 17.83 1e-09 COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism].

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 318 322 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 178 368 191 PF01040 none UbiA prenyltransferase family IPR000537
Phobius 250 272 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 145 167 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 239 249 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 323 342 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 343 353 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 216 238 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 144 144 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 205 215 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 298 317 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 374 377 4 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 273 297 25 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 354 373 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 125 377 253 PTHR11048 none none none
Phobius 179 204 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 125 377 253 PTHR11048:SF1 none none none
PANTHER 69 109 41 PTHR11048:SF1 none none none
PANTHER 69 109 41 PTHR11048 none none none
Phobius 168 178 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

7 Localization

Analysis Start End Length
TMHMM 179 201 22
TMHMM 145 167 22
TMHMM 298 320 22
TMHMM 354 376 22
TMHMM 250 272 22
TMHMM 327 344 17
TMHMM 216 238 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting