Protein : Qrob_P0641330.2 Q. robur
Protein Identifier  ? Qrob_P0641330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR10903:SF39 - TRANSLOCASE OF CHLOROPLAST 159, CHLOROPLASTIC (PTHR10903:SF39) Code Enzyme  EC:3.6.5.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1259  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0016817 hydrolase activity, acting on acid anhydrides Catalysis of the hydrolysis of any acid anhydride.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_044211 447 1251 + 805 Gaps:33 65.83 1270 63.16 0.0 Translocon at the outer envelope membrane of chloroplasts 159
blastp_kegg lcl|cit:102619896 467 1251 + 785 Gaps:23 60.47 1333 65.76 0.0 translocase of chloroplast 159 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10018516mg 467 1251 + 785 Gaps:23 60.42 1334 65.76 0.0 hypothetical protein
blastp_kegg lcl|vvi:100243553 467 1251 + 785 Gaps:23 55.02 1465 66.00 0.0 translocase of chloroplast 159 chloroplastic-like
blastp_kegg lcl|crb:CARUB_v10000033mg 467 1250 + 784 Gaps:29 53.58 1510 63.66 0.0 hypothetical protein
blastp_kegg lcl|ath:AT4G02510 467 1250 + 784 Gaps:29 53.83 1503 63.16 0.0 TOC159 translocase of chloroplast 159
blastp_kegg lcl|eus:EUTSA_v10028361mg 467 1250 + 784 Gaps:29 53.90 1501 62.92 0.0 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_911963 467 1250 + 784 Gaps:29 53.40 1515 63.29 0.0 TOC159
blastp_kegg lcl|cit:102617809 85 1258 + 1174 Gaps:151 96.00 1274 48.90 0.0 translocase of chloroplast 159 chloroplastic-like
blastp_kegg lcl|brp:103836738 467 1250 + 784 Gaps:28 51.99 1554 62.25 0.0 translocase of chloroplast 159 chloroplastic
blastp_pdb 1h65_C 618 824 + 207 Gaps:11 73.33 270 42.93 9e-34 mol:protein length:270 CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34
blastp_pdb 1h65_B 618 824 + 207 Gaps:11 73.33 270 42.93 9e-34 mol:protein length:270 CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34
blastp_pdb 1h65_A 618 824 + 207 Gaps:11 73.33 270 42.93 9e-34 mol:protein length:270 CHLOROPLAST OUTER ENVELOPE PROTEIN OEP34
blastp_pdb 3bb1_H 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_G 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_F 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_E 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_D 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_C 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_pdb 3bb1_B 618 824 + 207 Gaps:11 72.26 274 42.93 1e-33 mol:protein length:274 Translocase of chloroplast 34
blastp_uniprot_sprot sp|O81283|TC159_ARATH 467 1250 + 784 Gaps:29 53.83 1503 63.16 0.0 Translocase of chloroplast 159 chloroplastic OS Arabidopsis thaliana GN TOC159 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SLF3|TC132_ARATH 507 1250 + 744 Gaps:27 61.94 1206 46.99 0.0 Translocase of chloroplast 132 chloroplastic OS Arabidopsis thaliana GN TOC132 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LUS2|TC120_ARATH 505 1250 + 746 Gaps:31 68.78 1089 45.53 0.0 Translocase of chloroplast 120 chloroplastic OS Arabidopsis thaliana GN TOC120 PE 1 SV 1
blastp_uniprot_sprot sp|Q6S5G3|TOC90_ARATH 536 1246 + 711 Gaps:33 87.52 793 39.63 1e-137 Translocase of chloroplast 90 chloroplastic OS Arabidopsis thaliana GN TOC90 PE 1 SV 1
blastp_uniprot_sprot sp|Q41009|TOC34_PEA 618 824 + 207 Gaps:11 63.87 310 42.93 2e-32 Translocase of chloroplast 34 OS Pisum sativum GN TOC34 PE 1 SV 1
blastp_uniprot_sprot sp|Q38906|TOC34_ARATH 618 824 + 207 Gaps:14 63.58 313 38.69 1e-28 Translocase of chloroplast 34 chloroplastic OS Arabidopsis thaliana GN TOC34 PE 1 SV 2
blastp_uniprot_sprot sp|O23680|TOC33_ARATH 618 824 + 207 Gaps:10 67.00 297 37.69 1e-25 Translocase of chloroplast 33 chloroplastic OS Arabidopsis thaliana GN TOC33 PE 1 SV 1
blastp_uniprot_sprot sp|Q552Z6|GTPA_DICDI 614 825 + 212 Gaps:24 48.11 449 28.70 2e-12 GTP-binding protein A OS Dictyostelium discoideum GN gtpA PE 3 SV 1
rpsblast_cdd gnl|CDD|162148 505 1251 + 747 Gaps:11 98.82 763 63.26 0.0 TIGR00993 3a0901s04IAP86 chloroplast protein import component Toc86/159 G and M domains. The long precursor of the 86K protein originally described is proposed to have three domains. The N-terminal A-domain is acidic repetitive weakly conserved readily removed by proteolysis during chloroplast isolation and not required for protein translocation. The other domains are designated G (GTPase) and M (membrane anchor) this family includes most of the G domain and all of M.
rpsblast_cdd gnl|CDD|192864 979 1250 + 272 none 98.91 275 56.99 1e-109 pfam11886 DUF3406 Domain of unknown function (DUF3406). This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is about 270 amino acids in length. This domain is found associated with pfam04548.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 416 1255 840 PTHR10903 none none none
Phobius 1 1229 1229 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 599 843 245 G3DSA:3.40.50.300 none none IPR027417
PANTHER 416 1255 840 PTHR10903:SF39 none none none
Phobius 1230 1249 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 614 751 138 SSF52540 none none IPR027417
TIGRFAM 505 1253 749 TIGR00993 none 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains IPR005690
Pfam 619 775 157 PF04548 none AIG1 family IPR006703
Phobius 1250 1258 9 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 978 1248 271 PF11886 none Domain of unknown function (DUF3406) IPR024283
ProSiteProfiles 616 850 235 PS51720 none AIG1-type G domain profile. IPR006703

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 24 23

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting