Protein : Qrob_P0637880.2 Q. robur
Protein Identifier  ? Qrob_P0637880.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K12847 - U4/U6.U5 tri-snRNP-associated protein 2 Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 569  
Kegg Orthology  K12847
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_007G152400g 1 568 + 568 Gaps:10 100.00 568 80.81 0.0 hypothetical protein
blastp_kegg lcl|cam:101506337 1 568 + 568 Gaps:14 100.00 558 82.44 0.0 U4/U6.U5 tri-snRNP-associated protein 2-like
blastp_kegg lcl|gmx:100792642 1 568 + 568 Gaps:15 97.26 585 80.67 0.0 U4/U6.U5 tri-snRNP-associated protein 2-like
blastp_kegg lcl|pvu:PHAVU_008G270100g 1 566 + 566 Gaps:15 99.65 567 80.71 0.0 hypothetical protein
blastp_kegg lcl|gmx:100792529 1 568 + 568 Gaps:19 100.00 563 80.99 0.0 U4/U6.U5 tri-snRNP-associated protein 2-like
blastp_kegg lcl|rcu:RCOM_0670010 1 568 + 568 Gaps:13 100.00 557 80.61 0.0 ubiquitin specific protease 39 and snrnp assembly factor putative (EC:3.1.2.15)
blastp_kegg lcl|tcc:TCM_030360 1 568 + 568 Gaps:18 99.82 557 78.78 0.0 Ubiquitin C-terminal hydrolases superfamily protein
blastp_kegg lcl|cic:CICLE_v10004667mg 1 568 + 568 Gaps:16 100.00 554 81.05 0.0 hypothetical protein
blastp_kegg lcl|csv:101224038 1 568 + 568 Gaps:20 100.00 550 81.27 0.0 U4/U6.U5 tri-snRNP-associated protein 2-like
blastp_kegg lcl|csv:101218920 1 568 + 568 Gaps:20 100.00 550 81.09 0.0 U4/U6.U5 tri-snRNP-associated protein 2-like
blastp_pdb 2y6e_F 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_E 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_D 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_C 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_B 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_A 231 566 + 336 Gaps:70 95.91 367 26.42 2e-21 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2ibi_A 232 565 + 334 Gaps:41 89.04 374 27.33 1e-18 mol:protein length:374 Ubiquitin carboxyl-terminal hydrolase 2
blastp_pdb 3nhe_A 232 565 + 334 Gaps:41 95.69 348 27.63 1e-18 mol:protein length:348 Ubiquitin carboxyl-terminal hydrolase 2
blastp_pdb 2hd5_A 232 565 + 334 Gaps:41 92.76 359 27.33 1e-18 mol:protein length:359 Ubiquitin carboxyl-terminal hydrolase 2
blastp_pdb 3i3t_G 232 568 + 337 Gaps:55 98.59 355 26.00 2e-16 mol:protein length:355 Ubiquitin carboxyl-terminal hydrolase 21
blastp_uniprot_sprot sp|Q3TIX9|SNUT2_MOUSE 84 566 + 483 Gaps:29 85.11 564 52.50 8e-165 U4/U6.U5 tri-snRNP-associated protein 2 OS Mus musculus GN Usp39 PE 2 SV 2
blastp_uniprot_sprot sp|Q53GS9|SNUT2_HUMAN 82 566 + 485 Gaps:29 85.31 565 52.28 2e-164 U4/U6.U5 tri-snRNP-associated protein 2 OS Homo sapiens GN USP39 PE 1 SV 2
blastp_uniprot_sprot sp|Q5R761|SNUT2_PONAB 82 566 + 485 Gaps:29 85.31 565 52.07 4e-163 U4/U6.U5 tri-snRNP-associated protein 2 OS Pongo abelii GN USP39 PE 2 SV 1
blastp_uniprot_sprot sp|Q9USR2|UBP10_SCHPO 72 566 + 495 Gaps:48 93.43 502 43.50 2e-120 Probable mRNA-splicing protein ubp10 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN ubp10 PE 3 SV 1
blastp_uniprot_sprot sp|P43589|SAD1_YEAST 83 568 + 486 Gaps:85 99.78 448 31.99 5e-49 Pre-mRNA-splicing factor SAD1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SAD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y6I4|UBP3_HUMAN 133 568 + 436 Gaps:96 93.08 520 26.45 3e-22 Ubiquitin carboxyl-terminal hydrolase 3 OS Homo sapiens GN USP3 PE 1 SV 2
blastp_uniprot_sprot sp|Q91W36|UBP3_MOUSE 133 568 + 436 Gaps:96 93.08 520 26.24 2e-21 Ubiquitin carboxyl-terminal hydrolase 3 OS Mus musculus GN Usp3 PE 2 SV 1
blastp_uniprot_sprot sp|O57429|UBP2_CHICK 226 565 + 340 Gaps:33 94.96 357 26.55 6e-21 Ubiquitin carboxyl-terminal hydrolase 2 OS Gallus gallus GN USP2 PE 2 SV 1
blastp_uniprot_sprot sp|O88623|UBP2_MOUSE 232 565 + 334 Gaps:47 54.32 613 26.73 2e-18 Ubiquitin carboxyl-terminal hydrolase 2 OS Mus musculus GN Usp2 PE 1 SV 2
blastp_uniprot_sprot sp|O75604|UBP2_HUMAN 232 565 + 334 Gaps:41 55.04 605 27.03 4e-18 Ubiquitin carboxyl-terminal hydrolase 2 OS Homo sapiens GN USP2 PE 1 SV 2

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 59 568 510 PTHR24619 none none none
SUPERFAMILY 113 206 94 SSF57850 none none none
Pfam 234 564 331 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394
SMART 132 181 50 SM00290 none Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger IPR001607
ProSiteProfiles 131 192 62 PS50271 none Zinc finger UBP-type profile. IPR001607
ProSiteProfiles 234 567 334 PS50235 none Ubiquitin specific protease (USP) domain profile. IPR028889
Gene3D 113 208 96 G3DSA:3.30.40.10 none none IPR013083
Coils 49 70 22 Coil none none none
Pfam 133 194 62 PF02148 none Zn-finger in ubiquitin-hydrolases and other protein IPR001607
SUPERFAMILY 398 566 169 SSF54001 none none none
SUPERFAMILY 231 370 140 SSF54001 none none none
PANTHER 59 568 510 PTHR24619:SF122 none none none

0 Localization

0 Qtllist

0 Targeting