Protein : Qrob_P0631140.2 Q. robur
Protein Identifier  ? Qrob_P0631140.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11516//PTHR11516:SF30 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR) // SUBFAMILY NOT NAMED Code Enzyme  EC:1.2.4.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 434  
Kegg Orthology  K00161
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006096 glycolytic process The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006008mg 5 433 + 429 Gaps:2 99.31 432 86.48 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1339660 5 433 + 429 Gaps:3 98.85 433 86.45 0.0 pyruvate dehydrogenase putative (EC:1.2.4.1)
blastp_kegg lcl|pmum:103332130 5 433 + 429 Gaps:3 99.30 431 86.68 0.0 pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
blastp_kegg lcl|mdm:103439433 1 433 + 433 Gaps:5 100.00 432 85.65 0.0 pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
blastp_kegg lcl|pxb:103956356 1 433 + 433 Gaps:5 100.00 432 84.95 0.0 pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic
blastp_kegg lcl|pop:POPTR_0002s18020g 2 433 + 432 Gaps:6 99.10 442 86.53 0.0 POPTRDRAFT_755473 hypothetical protein
blastp_kegg lcl|cit:102622026 5 433 + 429 Gaps:2 98.85 434 85.31 0.0 pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic-like
blastp_kegg lcl|csv:101215598 1 433 + 433 Gaps:7 100.00 428 84.81 0.0 pyruvate dehydrogenase E1 component subunit alpha-like
blastp_kegg lcl|cic:CICLE_v10020210mg 5 433 + 429 Gaps:9 98.83 427 85.78 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_005037 11 433 + 423 Gaps:5 79.85 526 86.67 0.0 Pyruvate dehydrogenase E1 alpha ALPHA
blastp_pdb 1ni4_C 77 408 + 332 Gaps:24 88.77 365 39.81 4e-69 mol:protein length:365 Pyruvate dehydrogenase E1 component: Alpha su
blastp_pdb 1ni4_A 77 408 + 332 Gaps:24 88.77 365 39.81 4e-69 mol:protein length:365 Pyruvate dehydrogenase E1 component: Alpha su
blastp_pdb 3exe_G 77 408 + 332 Gaps:24 84.82 382 39.81 8e-69 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_pdb 3exe_E 77 408 + 332 Gaps:24 84.82 382 39.81 8e-69 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_pdb 3exe_C 77 408 + 332 Gaps:24 84.82 382 39.81 8e-69 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_pdb 3exe_A 77 408 + 332 Gaps:24 84.82 382 39.81 8e-69 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_pdb 2ozl_C 77 408 + 332 Gaps:24 88.77 365 39.51 2e-68 mol:protein length:365 Pyruvate dehydrogenase E1 component alpha sub
blastp_pdb 2ozl_A 77 408 + 332 Gaps:24 88.77 365 39.51 2e-68 mol:protein length:365 Pyruvate dehydrogenase E1 component alpha sub
blastp_pdb 3exh_G 77 408 + 332 Gaps:24 84.82 382 39.51 2e-68 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_pdb 3exh_C 77 408 + 332 Gaps:24 84.82 382 39.51 2e-68 mol:protein length:382 Pyruvate dehydrogenase E1 component subunit a
blastp_uniprot_sprot sp|O24457|ODPA3_ARATH 7 433 + 427 Gaps:12 98.36 428 83.14 0.0 Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic OS Arabidopsis thaliana GN PDH-E1 ALPHA PE 1 SV 1
blastp_uniprot_sprot sp|Q7XTJ3|ODPA3_ORYSJ 48 433 + 386 Gaps:4 91.76 425 80.51 0.0 Pyruvate dehydrogenase E1 component subunit alpha-3 chloroplastic OS Oryza sativa subsp. japonica GN Os04g0119400 PE 2 SV 2
blastp_uniprot_sprot sp|Q1XDM0|ODPA_PYRYE 78 407 + 330 none 95.38 346 66.97 5e-161 Pyruvate dehydrogenase E1 component subunit alpha OS Pyropia yezoensis GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|P51267|ODPA_PORPU 72 407 + 336 Gaps:3 98.55 344 65.78 7e-160 Pyruvate dehydrogenase E1 component subunit alpha OS Porphyra purpurea GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q92IS3|ODPA_RICCN 70 405 + 336 Gaps:15 99.08 326 43.03 1e-92 Pyruvate dehydrogenase E1 component subunit alpha OS Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q4UKQ6|ODPA_RICFE 70 405 + 336 Gaps:13 99.08 326 41.80 1e-91 Pyruvate dehydrogenase E1 component subunit alpha OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q1RJX4|ODPA_RICBR 70 406 + 337 Gaps:13 99.39 326 41.05 2e-91 Pyruvate dehydrogenase E1 component subunit alpha OS Rickettsia bellii (strain RML369-C) GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q9R9N5|ODPA_RHIME 84 405 + 322 Gaps:8 90.80 348 45.25 2e-88 Pyruvate dehydrogenase E1 component subunit alpha OS Rhizobium meliloti (strain 1021) GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZDR4|ODPA_RICPR 70 406 + 337 Gaps:13 99.39 326 40.43 4e-88 Pyruvate dehydrogenase E1 component subunit alpha OS Rickettsia prowazekii (strain Madrid E) GN pdhA PE 3 SV 1
blastp_uniprot_sprot sp|Q68XA9|ODPA_RICTY 86 406 + 321 Gaps:7 96.32 326 40.13 1e-87 Pyruvate dehydrogenase E1 component subunit alpha OS Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN pdhA PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 47 408 362 G3DSA:3.40.50.970 none none IPR029061
Coils 364 392 29 Coil none none none
Pfam 94 396 303 PF00676 none Dehydrogenase E1 component IPR001017
TIGRFAM 85 406 322 TIGR03182 "KEGG:00010+1.2.4.1","KEGG:00020+1.2.4.1","KEGG:00620+1.2.4.1" PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit IPR017597
SUPERFAMILY 78 408 331 SSF52518 none none IPR029061
PANTHER 81 413 333 PTHR11516:SF30 none none none
PANTHER 81 413 333 PTHR11516 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting