Protein : Qrob_P0627340.2 Q. robur
Protein Identifier  ? Qrob_P0627340.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PTHR15447//PTHR15447:SF13 - POLY [ADP-RIBOSE] POLYMERASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.4.2.30
Gene Prediction Quality  validated Protein length 

Sequence

Length: 998  
Kegg Orthology  K10798
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0003950 NAD+ ADP-ribosyltransferase activity Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0006471 protein ADP-ribosylation The transfer, from NAD, of ADP-ribose to protein amino acids.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000811mg 1 997 + 997 Gaps:29 98.50 997 80.35 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10018683mg 8 997 + 990 Gaps:18 97.99 996 80.02 0.0 hypothetical protein
blastp_kegg lcl|cit:102621976 8 997 + 990 Gaps:18 97.99 996 80.02 0.0 poly [ADP-ribose] polymerase 1-like
blastp_kegg lcl|pmum:103334511 1 997 + 997 Gaps:28 98.49 992 80.45 0.0 poly [ADP-ribose] polymerase 1
blastp_kegg lcl|vvi:100261796 8 997 + 990 Gaps:32 97.97 984 80.39 0.0 poly [ADP-ribose] polymerase 1-like
blastp_kegg lcl|pxb:103957287 1 997 + 997 Gaps:50 98.45 966 80.55 0.0 poly [ADP-ribose] polymerase 1-like
blastp_kegg lcl|tcc:TCM_004107 8 997 + 990 Gaps:34 97.95 976 79.60 0.0 Poly(ADP-ribose) polymerase 2 isoform 1
blastp_kegg lcl|pxb:103946029 7 997 + 991 Gaps:50 97.83 966 80.63 0.0 poly [ADP-ribose] polymerase 1-like
blastp_kegg lcl|fve:101303864 1 997 + 997 Gaps:34 98.48 988 78.62 0.0 poly [ADP-ribose] polymerase 1-like
blastp_kegg lcl|pop:POPTR_0002s04220g 7 997 + 991 Gaps:33 97.99 996 80.23 0.0 POPTRDRAFT_830081 poly (ADP-ribose) polymerase family protein
blastp_pdb 2rcw_A 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase 1
blastp_pdb 1wok_D 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1wok_C 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1wok_B 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1wok_A 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1uk1_B 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1uk1_A 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1uk0_B 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1uk0_A 650 997 + 348 Gaps:25 95.71 350 50.75 2e-102 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 3l3m_A 650 997 + 348 Gaps:25 95.71 350 50.45 1e-101 mol:protein length:350 Poly [ADP-ribose] polymerase 1
blastp_uniprot_sprot sp|Q9ZP54|PARP1_ARATH 7 997 + 991 Gaps:45 98.07 983 71.37 0.0 Poly [ADP-ribose] polymerase 1 OS Arabidopsis thaliana GN PARP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7EYV7|PARP1_ORYSJ 8 997 + 990 Gaps:41 97.95 977 66.25 0.0 Poly [ADP-ribose] polymerase 1 OS Oryza sativa subsp. japonica GN PARP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZSV1|PARP1_MAIZE 8 997 + 990 Gaps:36 97.96 980 64.69 0.0 Poly [ADP-ribose] polymerase 1 OS Zea mays GN PARP1 PE 2 SV 1
blastp_uniprot_sprot sp|P11103|PARP1_MOUSE 10 997 + 988 Gaps:149 97.43 1013 39.92 0.0 Poly [ADP-ribose] polymerase 1 OS Mus musculus GN Parp1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9R152|PARP1_CRIGR 7 997 + 991 Gaps:143 97.73 1013 39.90 0.0 Poly [ADP-ribose] polymerase 1 OS Cricetulus griseus GN PARP1 PE 2 SV 3
blastp_uniprot_sprot sp|P09874|PARP1_HUMAN 8 997 + 990 Gaps:152 97.63 1014 40.00 0.0 Poly [ADP-ribose] polymerase 1 OS Homo sapiens GN PARP1 PE 1 SV 4
blastp_uniprot_sprot sp|P26446|PARP1_CHICK 8 997 + 990 Gaps:145 97.63 1011 40.22 0.0 Poly [ADP-ribose] polymerase 1 OS Gallus gallus GN PARP1 PE 1 SV 2
blastp_uniprot_sprot sp|P18493|PARP1_BOVIN 8 997 + 990 Gaps:146 97.64 1016 39.92 0.0 Poly [ADP-ribose] polymerase 1 OS Bos taurus GN PARP1 PE 2 SV 2
blastp_uniprot_sprot sp|P27008|PARP1_RAT 7 997 + 991 Gaps:142 97.73 1014 38.75 0.0 Poly [ADP-ribose] polymerase 1 OS Rattus norvegicus GN Parp1 PE 1 SV 4
blastp_uniprot_sprot sp|P31669|PARP1_XENLA 15 997 + 983 Gaps:140 98.10 998 39.53 0.0 Poly [ADP-ribose] polymerase 1 (Fragment) OS Xenopus laevis GN parp1 PE 2 SV 1

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 107 179 73 PS50064 none Poly(ADP-ribose) polymerase zinc finger domain profile. IPR001510
Gene3D 411 499 89 G3DSA:3.40.50.10190 none none IPR001357
Pfam 536 617 82 PF05406 none WGR domain IPR008893
SUPERFAMILY 784 997 214 SSF56399 none none none
SUPERFAMILY 8 96 89 SSF57716 none none none
SMART 411 489 79 SM00292 none breast cancer carboxy-terminal domain IPR001357
Pfam 110 179 70 PF00645 none Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region IPR001510
Pfam 13 90 78 PF00645 none Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region IPR001510
Pfam 784 997 214 PF00644 none Poly(ADP-ribose) polymerase catalytic domain IPR012317
Pfam 304 356 53 PF08063 none PADR1 (NUC008) domain IPR012982
ProSiteProfiles 10 93 84 PS50064 none Poly(ADP-ribose) polymerase zinc finger domain profile. IPR001510
SMART 539 622 84 SM00773 none Proposed nucleic acid binding domain IPR008893
PANTHER 1 997 997 PTHR15447 none none none
ProSiteProfiles 775 997 223 PS51059 none PARP catalytic domain profile. IPR012317
Pfam 417 486 70 PF00533 none BRCA1 C Terminus (BRCT) domain IPR001357
PANTHER 1 997 997 PTHR15447:SF13 none none none
Gene3D 623 784 162 G3DSA:1.20.142.10 none none IPR004102
ProSiteProfiles 650 768 119 PS51060 none PARP alpha-helical domain profile. IPR004102
Coils 256 277 22 Coil none none none
PIRSF 3 997 995 PIRSF000489 none none IPR008288
Gene3D 7 98 92 G3DSA:3.30.1740.10 none none IPR001510
Gene3D 105 201 97 G3DSA:3.30.1740.10 none none IPR001510
SUPERFAMILY 409 499 91 SSF52113 none none IPR001357
ProSiteProfiles 408 499 92 PS50172 none BRCT domain profile. IPR001357
SUPERFAMILY 507 633 127 SSF142921 none none IPR008893
Pfam 650 781 132 PF02877 none Poly(ADP-ribose) polymerase, regulatory domain IPR004102
SUPERFAMILY 650 784 135 SSF47587 none none IPR004102
SUPERFAMILY 105 188 84 SSF57716 none none none
Gene3D 785 997 213 G3DSA:3.90.228.10 none none IPR012317

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting