Protein : Qrob_P0622670.2 Q. robur
Protein Identifier  ? Qrob_P0622670.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K02967 - small subunit ribosomal protein S2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 237  
Kegg Orthology  K02967
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015935 small ribosomal subunit The smaller of the two subunits of a ribosome.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:10251494 1 235 + 235 none 99.58 236 94.04 8e-164 rps2 FvH4_C0016 ribosomal protein S2
blastp_kegg lcl|vvi:4025096 1 236 + 236 none 100.00 236 93.22 2e-163 rps2 ViviCp010 30S ribosomal protein S2
blastp_kegg lcl|pmum:18668006 1 235 + 235 none 99.58 236 93.19 6e-163 rps2 CP95_p078 ribosomal protein S2
blastp_kegg lcl|pper:PrpeC_p010 1 235 + 235 none 99.58 236 93.19 6e-163 rps2 ribosomal protein S2
blastp_kegg lcl|tcc:ThcaC_p010 1 236 + 236 none 100.00 236 91.53 7e-160 rps2 ribosomal protein S2
blastp_kegg lcl|csv:3429313 1 235 + 235 none 99.58 236 91.49 7e-159 rps2 CsCp015 30S ribosomal protein S2
blastp_kegg lcl|sot:4099858 1 236 + 236 none 100.00 236 90.25 1e-157 rps2 SotuCp010 30S ribosomal protein S2
blastp_kegg lcl|sly:3950420 1 236 + 236 none 100.00 236 90.25 1e-157 rps2 LyesC2p080 ribosomal protein S2
blastp_kegg lcl|cit:4271232 1 236 + 236 none 100.00 236 89.41 1e-156 rps2 CisiCp010 ribosomal protein S2
blastp_kegg lcl|rcu:RCOM_ORF00018 1 236 + 236 none 100.00 236 89.83 3e-156 rps2 ribosomal protein S2
blastp_pdb 3bbn_B 5 235 + 231 none 100.00 231 90.48 3e-156 mol:protein length:231 Ribosomal Protein S2
blastp_pdb 3uoq_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3sfs_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3ora_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3or9_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3kc4_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3izw_F 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3izv_F 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3i21_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_pdb 3i1z_B 8 230 + 223 none 92.53 241 43.05 1e-65 mol:protein length:241 30S ribosomal protein S2
blastp_uniprot_sprot sp|Q49L09|RR2_EUCGG 1 236 + 236 none 100.00 236 93.64 8e-166 30S ribosomal protein S2 chloroplastic OS Eucalyptus globulus subsp. globulus GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|Q0ZJ31|RR2_VITVI 1 236 + 236 none 100.00 236 93.22 6e-165 30S ribosomal protein S2 chloroplastic OS Vitis vinifera GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|A1XGM7|RR2_RANMC 1 235 + 235 none 99.58 236 92.77 1e-161 30S ribosomal protein S2 chloroplastic OS Ranunculus macranthus GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|Q09X28|RR2_MORIN 1 235 + 235 none 99.58 236 90.64 4e-161 30S ribosomal protein S2 chloroplastic OS Morus indica GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9N0|RR2_LIRTU 1 235 + 235 none 99.58 236 91.49 8e-161 30S ribosomal protein S2 chloroplastic OS Liriodendron tulipifera GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|A0A324|RR2_COFAR 1 236 + 236 none 100.00 236 91.10 1e-160 30S ribosomal protein S2 chloroplastic OS Coffea arabica GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|Q09FX2|RR2_NANDO 1 235 + 235 none 99.58 236 91.49 1e-160 30S ribosomal protein S2 chloroplastic OS Nandina domestica GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|B1A924|RR2_CARPA 1 235 + 235 none 99.58 236 91.06 2e-160 30S ribosomal protein S2 chloroplastic OS Carica papaya GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|Q4VZP4|RR2_CUCSA 1 235 + 235 none 99.58 236 91.49 2e-160 30S ribosomal protein S2 chloroplastic OS Cucumis sativus GN rps2 PE 3 SV 1
blastp_uniprot_sprot sp|P08242|RR2_SPIOL 1 236 + 236 none 100.00 236 90.68 9e-160 30S ribosomal protein S2 chloroplastic OS Spinacia oleracea GN rps2 PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 10 28 19 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 200 214 15 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 41 50 10 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 162 179 18 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 179 190 12 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 91 108 18 PR00395 none Ribosomal protein S2 signature IPR001865
Gene3D 104 156 53 G3DSA:1.10.287.610 none none none
Gene3D 162 231 70 G3DSA:3.40.50.10490 none none none
Gene3D 27 103 77 G3DSA:3.40.50.10490 none none none
ProSitePatterns 162 186 25 PS00963 none Ribosomal protein S2 signature 2. IPR018130
SUPERFAMILY 10 232 223 SSF52313 none none IPR023591
TIGRFAM 8 230 223 TIGR01011 none rpsB_bact: ribosomal protein uS2 IPR005706
PANTHER 4 234 231 PTHR12534 none none IPR005706
Pfam 13 229 217 PF00318 none Ribosomal protein S2 IPR001865
Hamap 6 229 224 MF_00291_B none 30S ribosomal protein S2 [rpsB]. IPR005706
ProSitePatterns 10 21 12 PS00962 none Ribosomal protein S2 signature 1. IPR018130

0 Localization

0 Qtllist

0 Targeting