Protein : Qrob_P0615950.2 Q. robur
Protein Identifier  ? Qrob_P0615950.2 Organism . Name  Quercus robur
Protein Description  (M=1) K02540 - minichromosome maintenance protein 2 Alias (in v1)  Qrob_P0962620.1
Code Enzyme  EC:3.6.4.12 Gene Prediction Quality  manual_v2
Protein length 

Sequence

Length: 954  
Kegg Orthology  K02540
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO:0006270 DNA replication initiation The process in which DNA-dependent DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action.
GO:0003678 DNA helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix.
GO:0042555 MCM complex A hexameric protein complex required for the initiation and regulation of DNA replication.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266163 6 952 + 947 Gaps:14 98.22 954 91.04 0.0 DNA replication licensing factor mcm2-like
blastp_kegg lcl|pper:PRUPE_ppa000996mg 10 952 + 943 Gaps:17 99.89 937 88.25 0.0 hypothetical protein
blastp_kegg lcl|fve:101306333 9 951 + 943 Gaps:21 99.57 938 86.83 0.0 DNA replication licensing factor mcm2-like
blastp_kegg lcl|pmum:103322175 10 952 + 943 Gaps:17 99.89 937 87.82 0.0 DNA replication licensing factor MCM2
blastp_kegg lcl|tcc:TCM_003529 3 951 + 949 Gaps:17 99.36 940 87.47 0.0 Minichromosome maintenance (MCM2/3/5) family protein isoform 2
blastp_kegg lcl|gmx:100799441 18 952 + 935 Gaps:16 99.78 929 86.95 0.0 DNA replication licensing factor mcm2-like
blastp_kegg lcl|gmx:100813006 12 952 + 941 Gaps:19 99.68 935 86.48 0.0 DNA replication licensing factor mcm2-like
blastp_kegg lcl|csv:101219546 16 952 + 937 Gaps:7 98.73 944 87.55 0.0 DNA replication licensing factor mcm2-like
blastp_kegg lcl|pop:POPTR_0001s12700g 7 952 + 946 Gaps:20 99.68 941 86.03 0.0 hypothetical protein
blastp_kegg lcl|cmo:103502828 1 952 + 952 Gaps:16 100.00 944 86.86 0.0 DNA replication licensing factor MCM2
blastp_pdb 3f9v_A 238 842 + 605 Gaps:43 97.48 595 40.69 2e-128 mol:protein length:595 Minichromosome maintenance protein MCM
blastp_pdb 2vl6_C 238 459 + 222 Gaps:11 83.21 268 30.94 1e-25 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_B 238 459 + 222 Gaps:11 83.21 268 30.94 1e-25 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_A 238 459 + 222 Gaps:11 83.21 268 30.94 1e-25 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 3f8t_A 450 849 + 400 Gaps:79 65.81 506 33.93 3e-24 mol:protein length:506 Predicted ATPase involved in replication cont
blastp_pdb 1ltl_F 268 521 + 254 Gaps:20 86.02 279 26.67 5e-15 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_E 268 521 + 254 Gaps:20 86.02 279 26.67 5e-15 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_D 268 521 + 254 Gaps:20 86.02 279 26.67 5e-15 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_C 268 521 + 254 Gaps:20 86.02 279 26.67 5e-15 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_B 268 521 + 254 Gaps:20 86.02 279 26.67 5e-15 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_uniprot_sprot sp|P55861|MCM2_XENLA 77 946 + 870 Gaps:46 93.23 886 54.48 0.0 DNA replication licensing factor mcm2 OS Xenopus laevis GN mcm2 PE 1 SV 2
blastp_uniprot_sprot sp|Q6DIH3|MCM2_XENTR 77 946 + 870 Gaps:52 93.21 884 54.25 0.0 DNA replication licensing factor mcm2 OS Xenopus tropicalis GN mcm2 PE 2 SV 1
blastp_uniprot_sprot sp|P49736|MCM2_HUMAN 85 946 + 862 Gaps:43 90.82 904 52.74 0.0 DNA replication licensing factor MCM2 OS Homo sapiens GN MCM2 PE 1 SV 4
blastp_uniprot_sprot sp|P49735|MCM2_DROME 77 946 + 870 Gaps:57 92.33 887 54.21 0.0 DNA replication licensing factor Mcm2 OS Drosophila melanogaster GN Mcm2 PE 1 SV 1
blastp_uniprot_sprot sp|P97310|MCM2_MOUSE 77 946 + 870 Gaps:47 91.70 904 52.35 0.0 DNA replication licensing factor MCM2 OS Mus musculus GN Mcm2 PE 1 SV 3
blastp_uniprot_sprot sp|P40377|MCM2_SCHPO 70 866 + 797 Gaps:55 92.29 830 53.92 0.0 DNA replication licensing factor mcm2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN mcm2 PE 1 SV 1
blastp_uniprot_sprot sp|P29469|MCM2_YEAST 13 865 + 853 Gaps:108 97.58 868 47.70 0.0 DNA replication licensing factor MCM2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN MCM2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UXG1|MCM_SULSO 238 842 + 605 Gaps:43 84.55 686 40.69 5e-127 Minichromosome maintenance protein MCM OS Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN MCM PE 1 SV 1
blastp_uniprot_sprot sp|Q43704|MCM31_MAIZE 236 842 + 607 Gaps:37 81.77 768 37.26 9e-109 DNA replication licensing factor MCM3 homolog 1 OS Zea mays GN ROA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SX04|MCM32_MAIZE 236 842 + 607 Gaps:37 81.77 768 37.10 2e-108 DNA replication licensing factor MCM3 homolog 2 OS Zea mays GN ROA2 PE 2 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 332 847 516 SM00350 none minichromosome maintenance proteins IPR001208
ProSiteProfiles 515 721 207 PS50051 none MCM family domain profile. IPR001208
Gene3D 414 488 75 G3DSA:2.40.50.140 none none IPR012340
Gene3D 335 362 28 G3DSA:2.40.50.140 none none IPR012340
SUPERFAMILY 525 849 325 SSF52540 none none IPR027417
Pfam 49 211 163 PF12619 none Mini-chromosome maintenance protein 2 IPR008045
PANTHER 188 945 758 PTHR11630 none none none
Gene3D 234 331 98 G3DSA:3.30.1640.10 none none none
PRINTS 479 490 12 PR01658 none Mini-chromosome maintenance (MCM) protein 2 signature IPR008045
PRINTS 403 417 15 PR01658 none Mini-chromosome maintenance (MCM) protein 2 signature IPR008045
PRINTS 464 475 12 PR01658 none Mini-chromosome maintenance (MCM) protein 2 signature IPR008045
PRINTS 345 362 18 PR01658 none Mini-chromosome maintenance (MCM) protein 2 signature IPR008045
PRINTS 368 380 13 PR01658 none Mini-chromosome maintenance (MCM) protein 2 signature IPR008045
PRINTS 644 657 14 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 556 571 16 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 616 630 15 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 695 703 9 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 668 680 13 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
ProSitePatterns 624 632 9 PS00847 "Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383" MCM family signature. IPR018525
PANTHER 188 945 758 PTHR11630:SF44 none none IPR008045
Gene3D 525 704 180 G3DSA:3.40.50.300 none none IPR027417
Pfam 502 846 345 PF00493 none MCM2/3/5 family IPR001208
Pfam 235 352 118 PF14551 none MCM N-terminal domain IPR027925
SUPERFAMILY 237 484 248 SSF50249 none none IPR012340

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting