Protein : Qrob_P0612600.2 Q. robur
Protein Identifier  ? Qrob_P0612600.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR10015//PTHR10015:SF146 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 318  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_015119 3 317 + 315 Gaps:41 99.07 323 62.19 1e-121 Heat shock transcription factor B2A putative
blastp_kegg lcl|pvu:PHAVU_004G119600g 3 317 + 315 Gaps:61 98.82 340 60.42 4e-117 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa009180mg 1 284 + 284 Gaps:30 93.73 303 65.49 3e-115 hypothetical protein
blastp_kegg lcl|cam:101507272 3 301 + 299 Gaps:50 94.88 332 59.68 8e-114 heat stress transcription factor B-2b-like
blastp_kegg lcl|gmx:100812267 3 317 + 315 Gaps:63 98.85 348 57.85 8e-113 heat stress transcription factor B-2b-like
blastp_kegg lcl|gmx:100817440 15 317 + 303 Gaps:53 92.90 338 62.74 3e-111 heat stress transcription factor B-2b-like
blastp_kegg lcl|pmum:103333238 17 284 + 268 Gaps:27 87.46 303 66.42 4e-111 heat stress transcription factor B-2a
blastp_kegg lcl|rcu:RCOM_1496640 3 287 + 285 Gaps:32 90.09 323 62.89 1e-110 Heat shock factor protein putative
blastp_kegg lcl|pxb:103960544 1 317 + 317 Gaps:40 100.00 297 62.96 3e-110 heat stress transcription factor B-2a
blastp_kegg lcl|gmx:100780987 1 317 + 317 Gaps:49 100.00 300 62.00 2e-109 heat stress transcription factor B-2a-like
blastp_pdb 2ldu_A 24 117 + 94 Gaps:11 84.00 125 46.67 3e-21 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 24 113 + 90 Gaps:10 94.34 106 43.00 1e-19 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 24 113 + 90 Gaps:10 94.34 106 43.00 1e-19 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 24 97 + 74 Gaps:11 83.33 102 40.00 2e-14 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 24 97 + 74 Gaps:11 92.39 92 40.00 4e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q9SCW4|HFB2A_ARATH 11 249 + 239 Gaps:30 83.28 299 58.23 2e-84 Heat stress transcription factor B-2a OS Arabidopsis thaliana GN HSFB2A PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z9C8|HFB2B_ORYSJ 12 289 + 278 Gaps:72 80.00 390 46.79 7e-75 Heat stress transcription factor B-2b OS Oryza sativa subsp. japonica GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q9T0D3|HFB2B_ARATH 15 301 + 287 Gaps:70 85.68 377 48.30 4e-74 Heat stress transcription factor B-2b OS Arabidopsis thaliana GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q652B0|HFB2C_ORYSJ 16 249 + 234 Gaps:62 65.20 454 47.30 2e-70 Heat stress transcription factor B-2c OS Oryza sativa subsp. japonica GN HSFB2C PE 2 SV 1
blastp_uniprot_sprot sp|P22335|HSF24_SOLPE 16 199 + 184 Gaps:20 63.12 301 52.63 1e-57 Heat shock factor protein HSF24 OS Solanum peruvianum GN HSF24 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C635|HSFB4_ARATH 18 197 + 180 Gaps:22 58.05 348 47.52 3e-53 Heat stress transcription factor B-4 OS Arabidopsis thaliana GN HSFB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XRX3|HFB2A_ORYSJ 23 250 + 228 Gaps:38 68.85 305 50.00 3e-53 Heat stress transcription factor B-2a OS Oryza sativa subsp. japonica GN HSFB2A PE 2 SV 2
blastp_uniprot_sprot sp|Q96320|HSFB1_ARATH 11 196 + 186 Gaps:16 66.20 284 51.06 5e-53 Heat stress transcription factor B-1 OS Arabidopsis thaliana GN HSFB1 PE 2 SV 2
blastp_uniprot_sprot sp|Q67TP9|HSFB1_ORYSJ 21 259 + 239 Gaps:13 79.47 302 42.50 6e-47 Heat stress transcription factor B-1 OS Oryza sativa subsp. japonica GN HSFB1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHZ0|HFB4B_ORYSJ 1 197 + 197 Gaps:26 71.94 310 40.36 1e-46 Heat stress transcription factor B-4b OS Oryza sativa subsp. japonica GN HSFB4B PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 21 113 93 SSF46785 none none none
Coils 167 188 22 Coil none none none
Pfam 24 115 92 PF00447 none HSF-type DNA-binding IPR000232
PANTHER 10 201 192 PTHR10015 none none IPR027725
PRINTS 75 87 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 24 47 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 62 74 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
Gene3D 14 108 95 G3DSA:1.10.10.10 none none IPR011991
ProSitePatterns 63 87 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
PANTHER 10 201 192 PTHR10015:SF146 none none IPR027709
SMART 20 113 94 SM00415 none heat shock factor IPR000232

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4

0 Targeting