Protein : Qrob_P0610030.2 Q. robur
Protein Identifier  ? Qrob_P0610030.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) PTHR11785//PTHR11785:SF237 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 485  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003333 amino acid transmembrane transport The directed movement of amino acids, organic acids containing one or more amino substituents across a membrane by means of some agent such as a transporter or pore.
GO:0015171 amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103334864 3 483 + 481 none 98.97 486 80.87 0.0 probable polyamine transporter At1g31830
blastp_kegg lcl|pper:PRUPE_ppa005214mg 16 483 + 468 none 99.15 472 81.41 0.0 hypothetical protein
blastp_kegg lcl|pxb:103946605 3 482 + 480 none 99.17 484 78.96 0.0 probable polyamine transporter At1g31830
blastp_kegg lcl|mdm:103422107 3 480 + 478 Gaps:4 98.75 480 79.96 0.0 probable polyamine transporter At1g31830
blastp_kegg lcl|pxb:103932589 3 480 + 478 Gaps:4 98.75 480 79.96 0.0 probable polyamine transporter At1g31830
blastp_kegg lcl|mdm:103410599 3 482 + 480 none 99.17 484 77.92 0.0 probable polyamine transporter At1g31830
blastp_kegg lcl|vvi:100267611 20 484 + 465 none 99.15 469 83.87 0.0 uncharacterized LOC100267611
blastp_kegg lcl|tcc:TCM_001632 2 484 + 483 none 90.79 532 76.81 0.0 Amino acid permease family protein
blastp_kegg lcl|rcu:RCOM_0866340 3 481 + 479 none 98.56 486 76.62 0.0 amino acid transporter putative
blastp_kegg lcl|pmum:103336731 1 479 + 479 none 99.17 483 74.95 0.0 probable polyamine transporter At1g31830
blastp_pdb 3ncy_D 39 355 + 317 Gaps:30 72.13 445 25.23 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_C 39 355 + 317 Gaps:30 72.13 445 25.23 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_B 39 355 + 317 Gaps:30 72.13 445 25.23 1e-12 mol:protein length:445 AdiC
blastp_pdb 3ncy_A 39 355 + 317 Gaps:30 72.13 445 25.23 1e-12 mol:protein length:445 AdiC
blastp_pdb 3lrc_D 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_C 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_B 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrc_A 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrb_B 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_pdb 3lrb_A 39 355 + 317 Gaps:22 72.13 445 24.92 8e-12 mol:protein length:445 Arginine/agmatine antiporter
blastp_uniprot_sprot sp|Q9C6S5|PHSB_ARATH 1 483 + 483 Gaps:8 99.19 495 69.25 0.0 Probable polyamine transporter At1g31830 OS Arabidopsis thaliana GN At1g31830 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFL1|RMV1_ARATH 3 476 + 474 Gaps:4 97.55 490 68.20 0.0 Polyamine transporter RMV1 OS Arabidopsis thaliana GN RMV1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z8D0|PUT1_ORYSJ 6 474 + 469 Gaps:2 88.70 531 68.15 0.0 Polyamine transporter PUT1 OS Oryza sativa subsp. japonica GN PUT1 PE 1 SV 1
blastp_uniprot_sprot sp|A2X8M8|PUT1_ORYSI 6 474 + 469 Gaps:2 88.70 531 68.15 0.0 Polyamine transporter PUT1 OS Oryza sativa subsp. indica GN PUT1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C6S4|PHSA_ARATH 30 484 + 455 none 94.40 482 68.13 0.0 Probable polyamine transporter At1g31820 OS Arabidopsis thaliana GN At1g31820 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LH39|PHSD_ARATH 22 484 + 463 Gaps:3 97.29 479 54.94 4e-179 Probable polyamine transporter At3g19553 OS Arabidopsis thaliana GN At3g19553 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LHN7|PHSC_ARATH 18 479 + 462 Gaps:2 97.07 478 43.75 2e-132 Probable polyamine transporter At3g13620 OS Arabidopsis thaliana GN At3g13620 PE 2 SV 1
blastp_uniprot_sprot sp|P37034|Y1691_LEGPH 70 411 + 342 Gaps:63 79.96 464 29.92 5e-15 Uncharacterized transporter lpg1691 OS Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN lpg1691 PE 3 SV 2
blastp_uniprot_sprot sp|P60066|ADIC_SALTY 39 355 + 317 Gaps:30 72.13 445 25.23 4e-12 Arginine/agmatine antiporter OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN adiC PE 1 SV 1
blastp_uniprot_sprot sp|P60065|ADIC_SALTI 39 355 + 317 Gaps:30 72.13 445 25.23 4e-12 Arginine/agmatine antiporter OS Salmonella typhi GN adiC PE 3 SV 1

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 144 154 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 60 70 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 121 125 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 54 438 385 PF13520 none Amino acid permease IPR002293
Phobius 458 484 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 179 202 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 41 59 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 2 474 473 PTHR11785:SF237 none none none
Phobius 367 371 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 299 319 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 203 254 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 433 437 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 71 91 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 372 392 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 280 298 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PIRSF 33 479 447 PIRSF006060 none none IPR002293
Phobius 126 143 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 393 412 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 413 432 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 155 173 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 347 366 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 438 457 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 320 346 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 92 102 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 255 279 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 2 474 473 PTHR11785 none none IPR002293
Phobius 103 120 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 40 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 174 178 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

10 Localization

Analysis Start End Length
TMHMM 105 124 19
TMHMM 42 61 19
TMHMM 71 93 22
TMHMM 409 431 22
TMHMM 255 277 22
TMHMM 436 454 18
TMHMM 180 202 22
TMHMM 373 392 19
TMHMM 146 168 22
TMHMM 347 369 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting