Protein : Qrob_P0608020.2 Q. robur
Protein Identifier  ? Qrob_P0608020.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 1.3.1.93 - Very-long-chain enoyl-CoA reductase. Code Enzyme  EC:1.3.1.93, EC:1.3.1.38
Gene Prediction Quality  validated Protein length 

Sequence

Length: 309  
Kegg Orthology  K10258
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1206840 1 308 + 308 Gaps:2 100.00 310 88.71 0.0 Synaptic glycoprotein SC2 putative (EC:1.3.99.5)
blastp_kegg lcl|tcc:TCM_042773 1 308 + 308 Gaps:2 100.00 310 89.03 0.0 3-oxo-5-alpha-steroid 4-dehydrogenase family protein isoform 1
blastp_kegg lcl|cic:CICLE_v10032183mg 1 308 + 308 Gaps:2 100.00 310 88.39 0.0 hypothetical protein
blastp_kegg lcl|cit:102619239 1 308 + 308 Gaps:2 100.00 310 88.39 0.0 very-long-chain enoyl-CoA reductase-like
blastp_kegg lcl|mdm:103445586 1 308 + 308 Gaps:2 100.00 310 87.74 0.0 very-long-chain enoyl-CoA reductase
blastp_kegg lcl|pop:POPTR_0010s21190g 1 308 + 308 Gaps:2 100.00 310 88.06 0.0 POPTRDRAFT_822481 3-oxo-5-alpha-steroid 4-dehydrogenase family protein
blastp_kegg lcl|pop:POPTR_0008s05550g 1 308 + 308 Gaps:2 100.00 310 88.39 0.0 POPTRDRAFT_720621 3-oxo-5-alpha-steroid 4-dehydrogenase family protein
blastp_kegg lcl|csv:101213758 1 308 + 308 Gaps:2 100.00 310 87.42 0.0 very-long-chain enoyl-CoA reductase-like
blastp_kegg lcl|cmo:103498153 1 308 + 308 Gaps:2 100.00 310 87.10 0.0 very-long-chain enoyl-CoA reductase
blastp_kegg lcl|gmx:100785393 1 308 + 308 Gaps:3 100.00 309 89.64 0.0 trans-2 3-enoyl-CoA reductase-like
blastp_uniprot_sprot sp|Q9M2U2|ECR_ARATH 1 308 + 308 Gaps:2 100.00 310 83.23 0.0 Very-long-chain enoyl-CoA reductase OS Arabidopsis thaliana GN ECR PE 2 SV 1
blastp_uniprot_sprot sp|Q55C17|TECR_DICDI 1 308 + 308 Gaps:18 99.33 300 42.62 6e-65 Very-long-chain enoyl-CoA reductase OS Dictyostelium discoideum GN gpsn2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9N5Y2|TECR_CAEEL 20 308 + 289 Gaps:30 92.53 308 38.95 4e-58 Probable very-long-chain enoyl-CoA reductase art-1 OS Caenorhabditis elegans GN art-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9NZ01|TECR_HUMAN 2 288 + 287 Gaps:18 93.83 308 39.45 6e-57 Very-long-chain enoyl-CoA reductase OS Homo sapiens GN TECR PE 1 SV 1
blastp_uniprot_sprot sp|Q3ZCD7|TECR_BOVIN 2 288 + 287 Gaps:16 93.83 308 39.10 1e-56 Very-long-chain enoyl-CoA reductase OS Bos taurus GN TECR PE 2 SV 1
blastp_uniprot_sprot sp|Q64232|TECR_RAT 19 288 + 270 Gaps:16 88.31 308 41.18 2e-56 Very-long-chain enoyl-CoA reductase OS Rattus norvegicus GN Tecr PE 2 SV 1
blastp_uniprot_sprot sp|Q9CY27|TECR_MOUSE 19 288 + 270 Gaps:16 88.31 308 41.18 3e-56 Very-long-chain enoyl-CoA reductase OS Mus musculus GN Tecr PE 2 SV 1
blastp_uniprot_sprot sp|Q5HYJ1|TECRL_HUMAN 19 290 + 272 Gaps:13 75.21 363 34.07 7e-46 Trans-2 3-enoyl-CoA reductase-like OS Homo sapiens GN TECRL PE 2 SV 1
blastp_uniprot_sprot sp|Q8BFZ1|TECRL_MOUSE 19 290 + 272 Gaps:13 75.62 361 34.07 1e-44 Trans-2 3-enoyl-CoA reductase-like OS Mus musculus GN Tecrl PE 2 SV 1
blastp_uniprot_sprot sp|Q3SZ89|TECRL_BOVIN 2 277 + 276 Gaps:13 76.31 363 32.13 2e-42 Trans-2 3-enoyl-CoA reductase-like OS Bos taurus GN TECRL PE 2 SV 1
rpsblast_cdd gnl|CDD|178174 1 308 + 308 Gaps:2 100.00 308 81.49 1e-172 PLN02560 PLN02560 enoyl-CoA reductase.
rpsblast_cdd gnl|CDD|111444 156 308 + 153 Gaps:12 99.33 150 35.57 3e-24 pfam02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase. This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases EC:1.3.99.5 Also known as Steroid 5-alpha-reductase the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor < > 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2 a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development.
rpsblast_cdd gnl|CDD|178015 224 308 + 85 Gaps:5 30.77 260 38.75 9e-08 PLN02392 PLN02392 probable steroid reductase DET2.
rpsblast_kog gnl|CDD|36852 1 308 + 308 Gaps:17 100.00 297 52.19 1e-100 KOG1639 KOG1639 KOG1639 Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism].
rpsblast_kog gnl|CDD|36851 137 308 + 172 Gaps:11 64.98 257 32.34 1e-18 KOG1638 KOG1638 KOG1638 Steroid reductase [Lipid transport and metabolism].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 279 308 30 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 1 81 81 SSF54236 none none IPR029071
PANTHER 1 308 308 PTHR10556 none none none
Gene3D 1 79 79 G3DSA:3.10.20.90 none none none
Phobius 260 278 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 168 186 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 308 308 PTHR10556:SF28 none none none
Phobius 112 167 56 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 197 278 82 PS50244 "Reactome:REACT_22258" Steroid 5-alpha reductase C-terminal domain profile. IPR001104
Phobius 1 91 91 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 92 111 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 157 306 150 PF02544 "Reactome:REACT_22258" 3-oxo-5-alpha-steroid 4-dehydrogenase IPR001104
Phobius 187 197 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 216 259 44 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 198 215 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 257 279 22
TMHMM 92 114 22
TMHMM 162 181 19
TMHMM 124 141 17
TMHMM 196 218 22
TMHMM 231 253 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting