Protein : Qrob_P0604260.2 Q. robur
Protein Identifier  ? Qrob_P0604260.2 Organism . Name  Quercus robur
Score  100.1 Score Type  egn
Protein Description  (M=1) 2.6.1.19 - 4-aminobutyrate--2-oxoglutarate transaminase. Code Enzyme  EC:2.6.1.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 452  
Kegg Orthology  K16871
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008483 transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_002027 3 451 + 449 Gaps:47 93.71 525 79.67 0.0 Pyridoxal phosphate-dependent transferases superfamily protein
blastp_kegg lcl|zma:103631946 3 451 + 449 Gaps:47 95.53 515 79.27 0.0 gamma aminobutyrate transaminase 3 chloroplastic
blastp_kegg lcl|pop:POPTR_0016s02000g 5 451 + 447 Gaps:48 95.14 514 79.75 0.0 POPTRDRAFT_835348 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s02170g 5 451 + 447 Gaps:48 95.14 514 79.55 0.0 POPTRDRAFT_652454 POLLEN-PISTIL INTERACTION 2 family protein
blastp_kegg lcl|pxb:103941119 3 451 + 449 Gaps:46 94.63 521 78.30 0.0 gamma aminobutyrate transaminase 3 chloroplastic-like
blastp_kegg lcl|mdm:103441440 3 451 + 449 Gaps:46 95.91 514 77.89 0.0 GABA-T2 gamma aminobutyrate transaminase 3 chloroplastic (EC:2.6.1.96)
blastp_kegg lcl|pxb:103939502 3 450 + 448 Gaps:46 95.72 514 78.25 0.0 probable gamma-aminobutyrate transaminase 3 mitochondrial
blastp_kegg lcl|cic:CICLE_v10011509mg 5 450 + 446 Gaps:50 94.55 514 79.01 0.0 hypothetical protein
blastp_kegg lcl|cit:102624895 5 450 + 446 Gaps:50 94.55 514 79.01 0.0 gamma aminobutyrate transaminase 3 chloroplastic-like
blastp_kegg lcl|mdm:103429193 3 450 + 448 Gaps:46 95.72 514 77.85 0.0 gamma-aminobutyrate transaminase 1 mitochondrial-like
blastp_pdb 3nui_B 65 436 + 372 Gaps:45 86.82 478 37.83 1e-100 mol:protein length:478 Pyruvate transaminase
blastp_pdb 3nui_A 65 436 + 372 Gaps:45 86.82 478 37.83 1e-100 mol:protein length:478 Pyruvate transaminase
blastp_pdb 3gju_A 66 419 + 354 Gaps:33 77.17 460 43.94 4e-99 mol:protein length:460 Putative aminotransferase
blastp_pdb 3fcr_A 66 439 + 374 Gaps:50 92.14 458 37.44 1e-93 mol:protein length:458 putative aminotransferase
blastp_pdb 4ah3_D 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA-TRANSAMINASE
blastp_pdb 4ah3_C 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA-TRANSAMINASE
blastp_pdb 4ah3_B 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA-TRANSAMINASE
blastp_pdb 4ah3_A 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA-TRANSAMINASE
blastp_pdb 4a72_D 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA TRANSAMINASE
blastp_pdb 4a72_C 29 444 + 416 Gaps:56 98.91 459 35.46 3e-83 mol:protein length:459 OMEGA TRANSAMINASE
blastp_uniprot_sprot sp|Q84P54|GATP1_SOLLC 20 450 + 431 Gaps:48 91.84 515 75.90 0.0 Gamma aminobutyrate transaminase 1 mitochondrial OS Solanum lycopersicum GN GABA-TP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q84P52|GATP3_SOLLC 8 451 + 444 Gaps:48 93.46 520 74.28 0.0 Gamma aminobutyrate transaminase 3 chloroplastic OS Solanum lycopersicum GN GABA-TP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XN11|GATP1_ORYSJ 42 451 + 410 Gaps:45 88.18 516 75.38 0.0 Gamma-aminobutyrate transaminase 1 mitochondrial OS Oryza sativa subsp. japonica GN OSL2 PE 1 SV 2
blastp_uniprot_sprot sp|Q01K11|GATP1_ORYSI 36 451 + 416 Gaps:45 89.34 516 74.40 0.0 Gamma-aminobutyrate transaminase 1 mitochondrial OS Oryza sativa subsp. indica GN OsI_17385 PE 3 SV 1
blastp_uniprot_sprot sp|B8BBZ7|GATP3_ORYSI 20 450 + 431 Gaps:50 92.35 510 73.46 0.0 Probable gamma-aminobutyrate transaminase 3 mitochondrial OS Oryza sativa subsp. indica GN OsI_28220 PE 3 SV 1
blastp_uniprot_sprot sp|Q94CE5|GATP_ARATH 23 451 + 429 Gaps:46 94.25 504 73.47 0.0 Gamma-aminobutyrate transaminase POP2 mitochondrial OS Arabidopsis thaliana GN POP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6ZCF0|GATP3_ORYSJ 20 450 + 431 Gaps:50 92.35 510 73.25 0.0 Probable gamma-aminobutyrate transaminase 3 mitochondrial OS Oryza sativa subsp. japonica GN Os08g0205900 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XN12|GATP2_ORYSJ 20 451 + 432 Gaps:49 95.17 497 68.92 0.0 Probable gamma-aminobutyrate transaminase 2 mitochondrial OS Oryza sativa subsp. japonica GN Os04g0614500 PE 2 SV 2
blastp_uniprot_sprot sp|Q01K12|GATP2_ORYSI 20 451 + 432 Gaps:49 95.17 497 68.92 0.0 Probable gamma-aminobutyrate transaminase 2 mitochondrial OS Oryza sativa subsp. indica GN OsI_17384 PE 3 SV 1
blastp_uniprot_sprot sp|Q84P53|GATP2_SOLLC 38 451 + 414 Gaps:46 100.00 458 67.90 0.0 Gamma aminobutyrate transaminase 2 OS Solanum lycopersicum GN GABA-TP2 PE 1 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 57 438 382 SSF53383 none none IPR015424
PANTHER 40 451 412 PTHR11986:SF49 none none none
Gene3D 100 365 266 G3DSA:3.40.640.10 none none IPR015421
Gene3D 47 99 53 G3DSA:3.90.1150.10 none none IPR015422
Gene3D 368 388 21 G3DSA:3.90.1150.10 none none IPR015422
Gene3D 394 439 46 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 40 451 412 PTHR11986 none none IPR005814
ProSitePatterns 276 313 38 PS00600 none Aminotransferases class-III pyridoxal-phosphate attachment site. IPR005814
Coils 429 450 22 Coil none none none
Pfam 66 389 324 PF00202 none Aminotransferase class-III IPR005814

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting