Protein : Qrob_P0601330.2 Q. robur
Protein Identifier  ? Qrob_P0601330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase. Code Enzyme  EC:1.1.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 215  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006072 glycerol-3-phosphate metabolic process The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.
GO:0009331 glycerol-3-phosphate dehydrogenase complex An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate.
GO:0004368 glycerol-3-phosphate dehydrogenase activity Catalysis of the reaction: sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103406273 1 129 + 129 Gaps:1 34.78 368 69.53 3e-46 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial-like
blastp_kegg lcl|mdm:103426366 1 127 + 127 Gaps:1 23.20 543 70.63 2e-45 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial-like
blastp_kegg lcl|pxb:103958391 1 129 + 129 Gaps:1 20.22 633 68.75 6e-42 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial
blastp_kegg lcl|mdm:103428073 9 129 + 121 none 19.24 629 70.25 6e-42 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa002830mg 9 129 + 121 none 19.24 629 67.77 1e-40 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G245200g 9 129 + 121 Gaps:4 19.55 629 66.67 8e-40 hypothetical protein
blastp_kegg lcl|vvi:100266754 1 129 + 129 Gaps:2 20.19 629 62.99 9e-40 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial-like
blastp_kegg lcl|cmo:103496445 1 179 + 179 Gaps:21 30.84 629 48.45 1e-39 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial
blastp_kegg lcl|pmum:103332475 29 129 + 101 none 15.96 633 73.27 1e-39 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial
blastp_kegg lcl|gmx:100808564 21 129 + 109 Gaps:1 17.17 629 72.22 2e-39 glycerol-3-phosphate dehydrogenase SDP6 mitochondrial-like
blastp_pdb 3da1_A 61 126 + 66 none 11.76 561 63.64 4e-11 mol:protein length:561 Glycerol-3-phosphate dehydrogenase
blastp_pdb 2rgh_A 98 133 + 36 none 6.30 571 58.33 6e-06 mol:protein length:571 Alpha-Glycerophosphate Oxidase
blastp_pdb 2rgo_B 98 133 + 36 none 5.93 607 58.33 6e-06 mol:protein length:607 Alpha-Glycerophosphate Oxidase
blastp_pdb 2rgo_A 98 133 + 36 none 5.93 607 58.33 6e-06 mol:protein length:607 Alpha-Glycerophosphate Oxidase
blastp_uniprot_sprot sp|Q9SS48|SDP6_ARATH 25 129 + 105 Gaps:1 16.53 629 65.38 2e-35 Glycerol-3-phosphate dehydrogenase SDP6 mitochondrial OS Arabidopsis thaliana GN SDP6 PE 1 SV 1
blastp_uniprot_sprot sp|P43304|GPDM_HUMAN 50 128 + 79 Gaps:4 10.59 727 64.94 2e-20 Glycerol-3-phosphate dehydrogenase mitochondrial OS Homo sapiens GN GPD2 PE 1 SV 3
blastp_uniprot_sprot sp|Q4R755|GPDM_MACFA 50 128 + 79 Gaps:4 10.59 727 64.94 3e-20 Glycerol-3-phosphate dehydrogenase mitochondrial OS Macaca fascicularis GN GPD2 PE 2 SV 1
blastp_uniprot_sprot sp|A7DZP8|GPDM_MESAU 51 126 + 76 Gaps:4 10.18 727 67.57 3e-20 Glycerol-3-phosphate dehydrogenase mitochondrial OS Mesocricetus auratus GN GPD2 PE 1 SV 1
blastp_uniprot_sprot sp|A6QLU1|GPDM_BOVIN 50 126 + 77 Gaps:4 10.32 727 66.67 7e-20 Glycerol-3-phosphate dehydrogenase mitochondrial OS Bos taurus GN GPD2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8SR40|GPDH_ENCCU 65 166 + 102 Gaps:10 17.92 614 40.91 9e-15 Probable glycerol-3-phosphate dehydrogenase OS Encephalitozoon cuniculi (strain GB-M1) GN ECU10_0870 PE 3 SV 1
blastp_uniprot_sprot sp|P35571|GPDM_RAT 58 126 + 69 Gaps:3 9.08 727 71.21 5e-13 Glycerol-3-phosphate dehydrogenase mitochondrial OS Rattus norvegicus GN Gpd2 PE 1 SV 1
blastp_uniprot_sprot sp|Q64521|GPDM_MOUSE 50 126 + 77 Gaps:4 10.32 727 65.33 9e-13 Glycerol-3-phosphate dehydrogenase mitochondrial OS Mus musculus GN Gpd2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9CG65|GLPO_LACLA 59 133 + 75 Gaps:1 12.15 609 45.95 9e-12 Alpha-glycerophosphate oxidase OS Lactococcus lactis subsp. lactis (strain IL1403) GN glpO PE 3 SV 1
blastp_uniprot_sprot sp|P90795|GPDM_CAEEL 48 129 + 82 Gaps:1 11.50 722 54.22 2e-10 Probable glycerol-3-phosphate dehydrogenase mitochondrial OS Caenorhabditis elegans GN T25G3.4 PE 3 SV 2
rpsblast_cdd gnl|CDD|178083 9 126 + 118 Gaps:2 18.50 627 65.52 5e-41 PLN02464 PLN02464 glycerol-3-phosphate dehydrogenase.
rpsblast_cdd gnl|CDD|30923 76 126 + 51 none 9.59 532 70.59 8e-19 COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion].
rpsblast_cdd gnl|CDD|183388 70 126 + 57 none 11.22 508 57.89 1e-18 PRK12266 glpD glycerol-3-phosphate dehydrogenase Reviewed.
rpsblast_cdd gnl|CDD|184008 74 126 + 53 none 10.56 502 58.49 2e-17 PRK13369 PRK13369 glycerol-3-phosphate dehydrogenase Provisional.
rpsblast_cdd gnl|CDD|201696 77 129 + 53 none 17.15 309 47.17 8e-12 pfam01266 DAO FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5 Sarcosine oxidase beta subunit EC:1.5.3.1 D-alanine oxidase EC:1.4.99.1 D-aspartate oxidase EC:1.4.3.1.
rpsblast_cdd gnl|CDD|182963 77 126 + 50 none 9.16 546 54.00 3e-11 PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A Provisional.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 126 125 PTHR11985 none none none
Phobius 1 11 11 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 2 126 125 PTHR11985:SF1 none none none
Gene3D 77 126 50 G3DSA:3.50.50.60 none none none
PRINTS 76 88 13 PR01001 "KEGG:00564+1.1.5.3","MetaCyc:PWY-4261","MetaCyc:PWY-6118","MetaCyc:PWY-6952" FAD-dependent glycerol-3-phosphate dehydrogenase family signature IPR000447
PRINTS 89 99 11 PR01001 "KEGG:00564+1.1.5.3","MetaCyc:PWY-4261","MetaCyc:PWY-6118","MetaCyc:PWY-6952" FAD-dependent glycerol-3-phosphate dehydrogenase family signature IPR000447
PRINTS 105 117 13 PR01001 "KEGG:00564+1.1.5.3","MetaCyc:PWY-4261","MetaCyc:PWY-6118","MetaCyc:PWY-6952" FAD-dependent glycerol-3-phosphate dehydrogenase family signature IPR000447
ProSitePatterns 81 98 18 PS00977 "KEGG:00564+1.1.5.3","MetaCyc:PWY-4261","MetaCyc:PWY-6118","MetaCyc:PWY-6952" FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. IPR000447
Phobius 28 32 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 77 139 63 PF01266 none FAD dependent oxidoreductase IPR006076
SUPERFAMILY 76 128 53 SSF51905 none none none
Phobius 33 214 182 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 32 32 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 12 27 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

1 Localization

Analysis Start End Length
TMHMM 12 34 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting