Protein : Qrob_P0598980.2 Q. robur
Protein Identifier  ? Qrob_P0598980.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K02725 - 20S proteasome subunit alpha 6 [EC:3.4.25.1] Code Enzyme  EC:3.4.25.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 154  
Kegg Orthology  K02725
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0004298 threonine-type endopeptidase activity Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO:0005839 proteasome core complex A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO:0051603 proteolysis involved in cellular protein catabolic process The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0004175 endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
GO:0019773 proteasome core complex, alpha-subunit complex The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1595040 1 140 + 140 Gaps:3 48.41 283 85.40 3e-76 proteasome subunit alpha type putative (EC:3.4.25.1)
blastp_kegg lcl|vvi:100257364 1 140 + 140 Gaps:3 48.24 284 85.40 4e-76 proteasome subunit alpha type-1-B-like
blastp_kegg lcl|csv:101224814 1 117 + 117 none 87.97 133 93.16 5e-76 proteasome subunit alpha type-1-B-like
blastp_kegg lcl|brp:103848568 1 140 + 140 Gaps:3 50.55 271 84.67 2e-75 proteasome subunit alpha type-1-A-like
blastp_kegg lcl|cic:CICLE_v10002110mg 1 118 + 118 none 42.91 275 94.07 2e-75 hypothetical protein
blastp_kegg lcl|brp:103839280 1 140 + 140 Gaps:3 49.82 275 84.67 2e-75 proteasome subunit alpha type-1-A
blastp_kegg lcl|pxb:103928779 1 140 + 140 Gaps:3 46.92 292 84.67 2e-75 proteasome subunit alpha type-1-A
blastp_kegg lcl|mdm:103450462 1 140 + 140 Gaps:3 47.90 286 84.67 3e-75 proteasome subunit alpha type-1-A-like
blastp_kegg lcl|pxb:103954929 1 140 + 140 Gaps:3 48.07 285 84.67 3e-75 proteasome subunit alpha type-1-A-like
blastp_kegg lcl|cam:101490607 1 140 + 140 Gaps:3 47.90 286 83.94 4e-75 proteasome subunit alpha type-1-B-like
blastp_pdb 1iru_T 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 20S proteasome
blastp_pdb 1iru_F 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 20S proteasome
blastp_pdb 3unh_S 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3unh_E 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3unf_S 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3unf_E 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3une_u 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3une_g 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3une_S 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_pdb 3une_E 1 117 + 117 none 44.49 263 59.83 4e-48 mol:protein length:263 Proteasome subunit alpha type-1
blastp_uniprot_sprot sp|O23712|PSA1B_ARATH 1 140 + 140 Gaps:3 49.46 277 83.21 6e-76 Proteasome subunit alpha type-1-B OS Arabidopsis thaliana GN PAF2 PE 1 SV 2
blastp_uniprot_sprot sp|P34066|PSA1A_ARATH 1 140 + 140 Gaps:3 49.28 278 83.21 1e-75 Proteasome subunit alpha type-1-A OS Arabidopsis thaliana GN PAF1 PE 1 SV 3
blastp_uniprot_sprot sp|P52428|PSA1_ORYSJ 1 140 + 140 Gaps:3 50.74 270 69.34 8e-59 Proteasome subunit alpha type-1 OS Oryza sativa subsp. japonica GN PAF1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5REN2|PSA1_PONAB 1 117 + 117 none 44.49 263 59.83 2e-47 Proteasome subunit alpha type-1 OS Pongo abelii GN PSMA1 PE 2 SV 1
blastp_uniprot_sprot sp|P18420|PSA1_RAT 1 117 + 117 none 44.49 263 59.83 2e-47 Proteasome subunit alpha type-1 OS Rattus norvegicus GN Psma1 PE 1 SV 2
blastp_uniprot_sprot sp|Q3T0X5|PSA1_BOVIN 1 117 + 117 none 44.49 263 59.83 2e-47 Proteasome subunit alpha type-1 OS Bos taurus GN PSMA1 PE 1 SV 1
blastp_uniprot_sprot sp|P25786|PSA1_HUMAN 1 117 + 117 none 44.49 263 59.83 2e-47 Proteasome subunit alpha type-1 OS Homo sapiens GN PSMA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9R1P4|PSA1_MOUSE 1 117 + 117 none 44.49 263 59.83 2e-47 Proteasome subunit alpha type-1 OS Mus musculus GN Psma1 PE 1 SV 1
blastp_uniprot_sprot sp|Q4R3H2|PSA1_MACFA 1 117 + 117 none 44.49 263 58.97 8e-47 Proteasome subunit alpha type-1 OS Macaca fascicularis GN PSMA1 PE 2 SV 1
blastp_uniprot_sprot sp|O14250|PSA6_SCHPO 1 117 + 117 none 43.01 272 59.83 3e-46 Probable proteasome subunit alpha type-6 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC6G10.04c PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 6 28 23 PS00388 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" Proteasome alpha-type subunits signature. IPR000426
ProSiteProfiles 21 153 133 PS51475 none Proteasome alpha-type subunit profile. IPR023332
Pfam 6 28 23 PF10584 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" Proteasome subunit A N-terminal signature IPR000426
PANTHER 1 118 118 PTHR11599 none none none
PANTHER 1 118 118 PTHR11599:SF12 none none none
Pfam 29 124 96 PF00227 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" Proteasome subunit IPR001353
SMART 6 28 23 SM00948 "Reactome:REACT_11045","Reactome:REACT_13","Reactome:REACT_13635","Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383","Reactome:REACT_578","Reactome:REACT_6185","Reactome:REACT_6850" Proteasome subunit A N-terminal signature Add an annotation IPR000426
Gene3D 4 119 116 G3DSA:3.60.20.10 none none IPR029055
SUPERFAMILY 4 133 130 SSF56235 none none IPR029055

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting