Protein : Qrob_P0598280.2 Q. robur
Protein Identifier  ? Qrob_P0598280.2 Organism . Name  Quercus robur
Score  50.0 Score Type  egn
Protein Description  (M=2) K05853 - Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum [EC:3.6.3.8] Code Enzyme  EC:3.6.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 689  
Kegg Orthology  K05853
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005388 calcium-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans).
GO:0070588 calcium ion transmembrane transport A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0033017 sarcoplasmic reticulum membrane The lipid bilayer surrounding the sarcoplasmic reticulum.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100783509 1 688 + 688 Gaps:8 67.93 1001 88.24 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type-like
blastp_kegg lcl|pxb:103951311 1 688 + 688 Gaps:9 67.96 1002 88.55 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type
blastp_kegg lcl|pop:POPTR_0014s01500g 1 688 + 688 Gaps:22 68.37 1015 86.02 0.0 POPTRDRAFT_834691 Calcium-transporting ATPase 3 family protein
blastp_kegg lcl|mdm:103455877 1 688 + 688 Gaps:9 67.96 1002 88.40 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type
blastp_kegg lcl|pxb:103963988 1 688 + 688 Gaps:9 67.96 1002 87.96 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type-like
blastp_kegg lcl|pper:PRUPE_ppa000801mg 1 688 + 688 Gaps:12 67.87 999 88.94 0.0 hypothetical protein
blastp_kegg lcl|vvi:100266003 1 688 + 688 Gaps:10 67.87 999 87.91 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type-like
blastp_kegg lcl|pvu:PHAVU_009G072800g 1 688 + 688 Gaps:8 67.93 1001 87.79 0.0 hypothetical protein
blastp_kegg lcl|pmum:103320480 1 688 + 688 Gaps:9 67.96 1002 88.11 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type
blastp_kegg lcl|fve:101292079 1 688 + 688 Gaps:8 67.93 1001 88.24 0.0 calcium-transporting ATPase 3 endoplasmic reticulum-type-like
blastp_pdb 3tlm_A 1 664 + 664 Gaps:34 66.94 992 53.01 0.0 mol:protein length:992 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3nan_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 SERCA1a
blastp_pdb 3nam_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 SERCA1a
blastp_pdb 3nal_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 SERCA1a
blastp_pdb 3n8g_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3n5k_B 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3n5k_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3fps_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3fpb_A 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_pdb 3fgo_B 1 664 + 664 Gaps:35 66.90 994 52.78 0.0 mol:protein length:994 Sarcoplasmic/endoplasmic reticulum calcium AT
blastp_uniprot_sprot sp|Q9SY55|ECA3_ARATH 1 688 + 688 Gaps:11 67.84 998 84.64 0.0 Calcium-transporting ATPase 3 endoplasmic reticulum-type OS Arabidopsis thaliana GN ECA3 PE 2 SV 3
blastp_uniprot_sprot sp|P54209|ATC1_DUNBI 1 663 + 663 Gaps:30 63.36 1037 56.77 0.0 Cation-transporting ATPase CA1 OS Dunaliella bioculata GN CA1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9YGL9|AT2A3_CHICK 1 664 + 664 Gaps:41 63.82 1042 54.14 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS Gallus gallus GN ATP2A3 PE 2 SV 1
blastp_uniprot_sprot sp|Q64518|AT2A3_MOUSE 1 681 + 681 Gaps:40 65.80 1038 53.29 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS Mus musculus GN Atp2a3 PE 2 SV 3
blastp_uniprot_sprot sp|Q93084|AT2A3_HUMAN 1 664 + 664 Gaps:33 63.76 1043 53.98 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS Homo sapiens GN ATP2A3 PE 1 SV 2
blastp_uniprot_sprot sp|P18596|AT2A3_RAT 1 664 + 664 Gaps:33 62.68 1061 53.68 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS Rattus norvegicus GN Atp2a3 PE 1 SV 2
blastp_uniprot_sprot sp|P70083|AT2A1_MAKNI 1 664 + 664 Gaps:32 66.47 996 53.63 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS Makaira nigricans GN atp2a1 PE 2 SV 2
blastp_uniprot_sprot sp|O14983|AT2A1_HUMAN 1 664 + 664 Gaps:35 66.43 1001 53.38 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS Homo sapiens GN ATP2A1 PE 1 SV 1
blastp_uniprot_sprot sp|Q92105|AT2A1_RANES 1 664 + 664 Gaps:37 66.90 994 54.29 0.0 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS Rana esculenta GN ATP2A1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7PPA5|ATC1_ANOGA 1 663 + 663 Gaps:37 65.23 1018 52.56 0.0 Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS Anopheles gambiae GN Ca-P60A PE 3 SV 5

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 662 688 27 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 511 534 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 347 664 318 G3DSA:1.20.1110.10 none none IPR023298
Phobius 535 604 70 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 436 436 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 14 279 266 G3DSA:3.40.1110.10 none none IPR023299
PANTHER 153 672 520 PTHR24093:SF280 none none IPR030330
PANTHER 1 48 48 PTHR24093:SF280 none none IPR030330
PANTHER 81 134 54 PTHR24093:SF280 none none IPR030330
Pfam 462 661 200 PF00689 none Cation transporting ATPase, C-terminus IPR006068
SUPERFAMILY 1 18 18 SSF81665 none none none
SUPERFAMILY 427 664 238 SSF81665 none none none
Phobius 461 510 50 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 437 460 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 21 392 372 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
TIGRFAM 349 463 115 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
PRINTS 378 394 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 350 366 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 409 434 26 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
ProSitePatterns 26 32 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
PRINTS 24 38 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 378 397 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 272 283 12 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 294 304 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 401 413 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
SUPERFAMILY 31 276 246 SSF81660 none none IPR023299
PANTHER 153 672 520 PTHR24093 none none none
PANTHER 1 48 48 PTHR24093 none none none
PANTHER 81 134 54 PTHR24093 none none none
Phobius 624 642 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
TMHMM 602 624 22
TMHMM 639 661 22
TMHMM 514 536 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting