Protein : Qrob_P0594950.2 Q. robur
Protein Identifier  ? Qrob_P0594950.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=20) K00025 - malate dehydrogenase [EC:1.1.1.37] Code Enzyme  EC:1.1.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 199  
Kegg Orthology  K00025
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO:0006108 malate metabolic process The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
GO:0016615 malate dehydrogenase activity Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10021075mg 9 198 + 190 Gaps:17 62.35 332 75.85 2e-102 hypothetical protein
blastp_kegg lcl|cit:102615934 9 198 + 190 Gaps:17 56.56 366 75.85 2e-101 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|pop:POPTR_0002s14270g 9 198 + 190 Gaps:17 62.35 332 74.40 2e-100 POPTRDRAFT_551994 hypothetical protein
blastp_kegg lcl|cmo:103483128 9 198 + 190 Gaps:17 56.87 364 74.88 5e-100 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|rcu:RCOM_1609380 9 198 + 190 Gaps:17 62.35 332 75.36 7e-100 malate dehydrogenase putative (EC:1.1.1.37)
blastp_kegg lcl|gmx:100783188 9 198 + 190 Gaps:17 55.50 373 74.88 7e-100 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|csv:101221189 9 198 + 190 Gaps:17 56.87 364 75.36 8e-100 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|vvi:100256452 9 198 + 190 Gaps:17 62.35 332 74.40 1e-99 malate dehydrogenase cytoplasmic-like
blastp_kegg lcl|pper:PRUPE_ppa008423mg 8 198 + 191 Gaps:17 62.65 332 72.60 2e-98 hypothetical protein
blastp_kegg lcl|mdm:103435358 8 198 + 191 Gaps:17 55.32 376 73.08 2e-98 malate dehydrogenase-like
blastp_pdb 5mdh_B 8 198 + 191 Gaps:18 62.76 333 56.46 4e-70 mol:protein length:333 MALATE DEHYDROGENASE
blastp_pdb 5mdh_A 8 198 + 191 Gaps:18 62.76 333 56.46 4e-70 mol:protein length:333 MALATE DEHYDROGENASE
blastp_pdb 4mdh_B 8 198 + 191 Gaps:18 62.57 334 56.46 4e-70 mol:protein length:334 CYTOPLASMIC MALATE DEHYDROGENASE
blastp_pdb 4mdh_A 8 198 + 191 Gaps:18 62.57 334 56.46 4e-70 mol:protein length:334 CYTOPLASMIC MALATE DEHYDROGENASE
blastp_pdb 3d5t_D 8 194 + 187 Gaps:23 60.42 331 51.00 2e-51 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_C 8 194 + 187 Gaps:23 60.42 331 51.00 2e-51 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_B 8 194 + 187 Gaps:23 60.42 331 51.00 2e-51 mol:protein length:331 Malate dehydrogenase
blastp_pdb 3d5t_A 8 194 + 187 Gaps:23 60.42 331 51.00 2e-51 mol:protein length:331 Malate dehydrogenase
blastp_pdb 1wzi_B 8 191 + 184 Gaps:22 59.94 327 48.47 8e-50 mol:protein length:327 Malate dehydrogenase
blastp_pdb 1wzi_A 8 191 + 184 Gaps:22 59.94 327 48.47 8e-50 mol:protein length:327 Malate dehydrogenase
blastp_uniprot_sprot sp|Q7XDC8|MDHC_ORYSJ 9 198 + 190 Gaps:17 62.35 332 71.50 2e-96 Malate dehydrogenase cytoplasmic OS Oryza sativa subsp. japonica GN Os10g0478200 PE 1 SV 3
blastp_uniprot_sprot sp|Q08062|MDHC_MAIZE 9 198 + 190 Gaps:17 62.35 332 70.05 4e-95 Malate dehydrogenase cytoplasmic OS Zea mays PE 1 SV 2
blastp_uniprot_sprot sp|Q9FSF0|MDH_TOBAC 9 197 + 189 Gaps:17 62.05 332 69.90 7e-94 Malate dehydrogenase OS Nicotiana tabacum GN MD1 PE 1 SV 1
blastp_uniprot_sprot sp|O48905|MDHC_MEDSA 9 198 + 190 Gaps:17 62.35 332 69.08 6e-93 Malate dehydrogenase cytoplasmic OS Medicago sativa GN CMDH PE 1 SV 1
blastp_uniprot_sprot sp|O24047|MDHC_MESCR 9 197 + 189 Gaps:17 62.05 332 69.42 3e-91 Malate dehydrogenase cytoplasmic OS Mesembryanthemum crystallinum GN MDH PE 2 SV 1
blastp_uniprot_sprot sp|P57106|MDHC2_ARATH 9 198 + 190 Gaps:17 62.35 332 68.60 6e-91 Malate dehydrogenase cytoplasmic 2 OS Arabidopsis thaliana GN At5g43330 PE 2 SV 1
blastp_uniprot_sprot sp|P93819|MDHC1_ARATH 9 198 + 190 Gaps:17 62.35 332 68.12 1e-90 Malate dehydrogenase cytoplasmic 1 OS Arabidopsis thaliana GN At1g04410 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SML8|MDHC_BETVU 9 197 + 189 Gaps:17 62.05 332 68.45 1e-89 Malate dehydrogenase cytoplasmic OS Beta vulgaris GN NR1 PE 1 SV 1
blastp_uniprot_sprot sp|Q3T145|MDHC_BOVIN 8 197 + 190 Gaps:18 62.28 334 56.73 1e-69 Malate dehydrogenase cytoplasmic OS Bos taurus GN MDH1 PE 2 SV 3
blastp_uniprot_sprot sp|P11708|MDHC_PIG 8 198 + 191 Gaps:18 62.57 334 56.46 1e-69 Malate dehydrogenase cytoplasmic OS Sus scrofa GN MDH1 PE 1 SV 4

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 9 37 29 G3DSA:3.40.50.720 none none IPR016040
Gene3D 38 197 160 G3DSA:3.90.110.10 none none IPR015955
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 22 198 177 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 15 21 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 38 197 160 SSF56327 none none IPR015955
PANTHER 10 198 189 PTHR23382 "KEGG:00020+1.1.1.37","KEGG:00270+1.1.1.37","KEGG:00620+1.1.1.37","KEGG:00630+1.1.1.37","KEGG:00680+1.1.1.37","KEGG:00710+1.1.1.37","KEGG:00720+1.1.1.37","MetaCyc:PWY-1622","MetaCyc:PWY-5392","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-5913","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7115","MetaCyc:PWY-7383";signature_desc=MALATE DEHYDROGENASE none IPR010945
Pfam 43 193 151 PF02866 none lactate/malate dehydrogenase, alpha/beta C-terminal domain IPR022383
Phobius 3 14 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting