Protein : Qrob_P0591980.2 Q. robur
Protein Identifier  ? Qrob_P0591980.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) 1.13.11.12 - Linoleate 13S-lipoxygenase. Code Enzyme  EC:1.13.11.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 290  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102590972 147 231 + 85 Gaps:3 10.17 865 44.32 8e-11 probable linoleate 9S-lipoxygenase 5-like
blastp_kegg lcl|pmum:103324270 178 248 + 71 none 8.06 881 47.89 8e-11 linoleate 9S-lipoxygenase 5 chloroplastic
blastp_kegg lcl|sly:101244618 147 231 + 85 Gaps:3 10.20 863 44.32 8e-11 probable linoleate 9S-lipoxygenase 5-like
blastp_kegg lcl|pper:PRUPE_ppa001207mg 184 248 + 65 none 7.38 881 50.77 2e-10 hypothetical protein
blastp_kegg lcl|sot:102594942 147 229 + 83 Gaps:3 10.07 854 41.86 2e-10 probable linoleate 9S-lipoxygenase 5-like
blastp_kegg lcl|pmum:103344624 178 220 + 43 none 4.70 915 72.09 2e-10 probable linoleate 9S-lipoxygenase 5
blastp_kegg lcl|sot:102589305 184 229 + 46 Gaps:3 5.68 862 67.35 2e-10 probable linoleate 9S-lipoxygenase 5-like
blastp_kegg lcl|sly:543818 184 220 + 37 none 4.29 862 81.08 2e-10 lipoxygenase (EC:1.13.11.12)
blastp_kegg lcl|pvu:PHAVU_010G135700g 147 283 + 137 Gaps:10 15.23 847 34.88 3e-10 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G091400g 177 249 + 73 none 8.46 863 43.84 3e-10 hypothetical protein
blastp_pdb 2iuk_B 147 274 + 128 Gaps:1 14.93 864 32.56 3e-11 mol:protein length:864 SEED LIPOXYGENASE
blastp_pdb 2iuk_A 147 274 + 128 Gaps:1 14.93 864 32.56 3e-11 mol:protein length:864 SEED LIPOXYGENASE
blastp_pdb 3bnb_A 178 248 + 71 none 8.46 839 42.25 4e-10 mol:protein length:839 Seed lipoxygenase-1
blastp_pdb 1fgm_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 SEED LIPOXYGENASE-1
blastp_pdb 2sbl_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 2sbl_B 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 1yge_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 1f8n_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 LIPOXYGENASE-1
blastp_pdb 3pzw_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 Seed lipoxygenase-1
blastp_pdb 1y4k_A 178 248 + 71 none 8.46 839 40.85 8e-10 mol:protein length:839 Seed lipoxygenase-1
blastp_uniprot_sprot sp|Q43191|LOX15_SOLTU 184 229 + 46 Gaps:3 5.68 862 67.35 3e-11 Probable linoleate 9S-lipoxygenase 5 OS Solanum tuberosum GN LOX1.5 PE 2 SV 1
blastp_uniprot_sprot sp|P24095|LOXX_SOYBN 147 274 + 128 Gaps:1 14.93 864 32.56 6e-11 Seed linoleate 9S-lipoxygenase OS Glycine max GN LOX1.4 PE 1 SV 1
blastp_uniprot_sprot sp|Q41238|LOX16_SOLTU 178 229 + 52 Gaps:3 6.42 857 52.73 8e-10 Linoleate 9S-lipoxygenase 6 (Fragment) OS Solanum tuberosum GN LOX1.6 PE 1 SV 1
blastp_uniprot_sprot sp|Q43190|LOX14_SOLTU 178 229 + 52 Gaps:3 6.40 860 52.73 8e-10 Probable linoleate 9S-lipoxygenase 4 OS Solanum tuberosum GN LOX1.4 PE 2 SV 1
blastp_uniprot_sprot sp|P38415|LOXA_SOLLC 178 229 + 52 Gaps:3 6.40 860 52.73 9e-10 Linoleate 9S-lipoxygenase A OS Solanum lycopersicum GN LOX1.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q53RB0|LOX4_ORYSJ 188 227 + 40 none 4.56 877 67.50 1e-09 Probable linoleate 9S-lipoxygenase 4 OS Oryza sativa subsp. japonica GN Os03g0700700 PE 2 SV 1
blastp_uniprot_sprot sp|P29114|LOX1_HORVU 178 227 + 50 none 5.80 862 54.00 2e-09 Linoleate 9S-lipoxygenase 1 OS Hordeum vulgare GN LOX1.1 PE 1 SV 2
blastp_uniprot_sprot sp|P08170|LOX1_SOYBN 178 248 + 71 none 8.46 839 40.85 3e-09 Seed linoleate 13S-lipoxygenase-1 OS Glycine max GN LOX1.1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LUW0|LOX5_ARATH 184 227 + 44 none 4.97 886 56.82 5e-09 Linoleate 9S-lipoxygenase 5 chloroplastic OS Arabidopsis thaliana GN LOX5 PE 1 SV 2
blastp_uniprot_sprot sp|P38416|LOXB_SOLLC 188 220 + 33 none 3.84 859 75.76 5e-09 Linoleate 9S-lipoxygenase B OS Solanum lycopersicum GN LOX1.2 PE 2 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 181 289 109 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 159 159 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 160 180 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 185 227 43 PF00305 none Lipoxygenase IPR013819
Gene3D 187 230 44 G3DSA:1.20.245.10 none none none
SUPERFAMILY 188 230 43 SSF48484 none none IPR013819
Gene3D 93 126 34 G3DSA:4.10.372.10 "UniPathway:UPA00382" none IPR027433

1 Localization

Analysis Start End Length
TMHMM 168 190 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting