Protein : Qrob_P0590800.2 Q. robur
Protein Identifier  ? Qrob_P0590800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR10015//PTHR10015:SF146 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 368  
Kegg Orthology  K09419
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256486 1 364 + 364 Gaps:69 99.34 305 71.95 2e-132 heat stress transcription factor B-2b-like
blastp_kegg lcl|cic:CICLE_v10021287mg 5 366 + 362 Gaps:64 99.03 309 70.59 6e-132 hypothetical protein
blastp_kegg lcl|cit:102619398 5 366 + 362 Gaps:64 99.03 309 70.26 3e-131 heat stress transcription factor B-2b-like
blastp_kegg lcl|tcc:TCM_016198 1 366 + 366 Gaps:54 100.00 314 71.34 7e-130 Winged-helix DNA-binding transcription factor family protein putative isoform 1
blastp_kegg lcl|csv:101224219 1 367 + 367 Gaps:44 99.41 341 65.78 3e-127 heat stress transcription factor B-2b-like
blastp_kegg lcl|csv:101203886 1 367 + 367 Gaps:44 99.41 341 65.78 3e-127 heat stress transcription factor B-2b-like
blastp_kegg lcl|pvu:PHAVU_002G155300g 1 366 + 366 Gaps:42 100.00 356 60.96 2e-126 hypothetical protein
blastp_kegg lcl|cam:101502512 1 361 + 361 Gaps:44 98.81 337 63.96 4e-126 heat stress transcription factor B-2b-like
blastp_kegg lcl|pop:POPTR_0001s08990g 1 366 + 366 Gaps:51 100.00 343 64.14 4e-125 POPTRDRAFT_548499 heat shock transcription factor HSF29 family protein
blastp_kegg lcl|mdm:103433016 1 366 + 366 Gaps:43 100.00 337 67.66 4e-123 heat stress transcription factor B-2b
blastp_pdb 2ldu_A 35 127 + 93 Gaps:11 83.20 125 50.96 4e-26 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 35 124 + 90 Gaps:10 94.34 106 43.00 5e-22 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 35 124 + 90 Gaps:10 94.34 106 43.00 5e-22 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 35 108 + 74 Gaps:11 83.33 102 40.00 7e-15 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 35 108 + 74 Gaps:11 92.39 92 40.00 2e-14 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q9T0D3|HFB2B_ARATH 26 366 + 341 Gaps:60 86.74 377 58.72 6e-106 Heat stress transcription factor B-2b OS Arabidopsis thaliana GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z9C8|HFB2B_ORYSJ 21 309 + 289 Gaps:35 73.85 390 54.17 9e-82 Heat stress transcription factor B-2b OS Oryza sativa subsp. japonica GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCW4|HFB2A_ARATH 27 309 + 283 Gaps:50 83.28 299 57.43 8e-79 Heat stress transcription factor B-2a OS Arabidopsis thaliana GN HSFB2A PE 2 SV 1
blastp_uniprot_sprot sp|Q652B0|HFB2C_ORYSJ 28 309 + 282 Gaps:54 66.08 454 49.33 8e-75 Heat stress transcription factor B-2c OS Oryza sativa subsp. japonica GN HSFB2C PE 2 SV 1
blastp_uniprot_sprot sp|P22335|HSF24_SOLPE 27 223 + 197 Gaps:15 63.12 301 56.84 3e-64 Heat shock factor protein HSF24 OS Solanum peruvianum GN HSF24 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XRX3|HFB2A_ORYSJ 34 222 + 189 Gaps:6 60.00 305 56.28 1e-58 Heat stress transcription factor B-2a OS Oryza sativa subsp. japonica GN HSFB2A PE 2 SV 2
blastp_uniprot_sprot sp|Q9C635|HSFB4_ARATH 29 223 + 195 Gaps:13 58.62 348 50.98 2e-57 Heat stress transcription factor B-4 OS Arabidopsis thaliana GN HSFB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q96320|HSFB1_ARATH 22 229 + 208 Gaps:15 67.96 284 51.81 8e-55 Heat stress transcription factor B-1 OS Arabidopsis thaliana GN HSFB1 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XHZ0|HFB4B_ORYSJ 29 222 + 194 Gaps:18 63.23 310 46.94 1e-49 Heat stress transcription factor B-4b OS Oryza sativa subsp. japonica GN HSFB4B PE 1 SV 1
blastp_uniprot_sprot sp|Q67U94|HFB4C_ORYSJ 34 222 + 189 Gaps:35 56.85 394 45.54 2e-47 Heat stress transcription factor B-4c OS Oryza sativa subsp. japonica GN HSFB4C PE 3 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 186 211 26 G3DSA:1.20.5.170 none none none
ProSitePatterns 74 98 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
Pfam 35 126 92 PF00447 none HSF-type DNA-binding IPR000232
PANTHER 176 209 34 PTHR10015 none none IPR027725
PANTHER 27 138 112 PTHR10015 none none IPR027725
Gene3D 32 124 93 G3DSA:1.10.10.10 none none IPR011991
PANTHER 176 209 34 PTHR10015:SF146 none none IPR027709
SMART 31 124 94 SM00415 none heat shock factor IPR000232
PRINTS 35 58 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 86 98 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 73 85 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PANTHER 27 138 112 PTHR10015:SF146 none none IPR027709
Coils 305 333 29 Coil none none none
SUPERFAMILY 32 124 93 SSF46785 none none none
Coils 184 212 29 Coil none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting