Protein : Qrob_P0585050.2 Q. robur
Protein Identifier  ? Qrob_P0585050.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 2.4.1.182 - Lipid-A-disaccharide synthase. Code Enzyme  EC:2.4.1.182
Gene Prediction Quality  validated Protein length 

Sequence

Length: 441  
Kegg Orthology  K00748
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009245 lipid A biosynthetic process The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of six fatty acyl chains linked to two glucosamine residues.
GO:0008915 lipid-A-disaccharide synthase activity Catalysis of the reaction: 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate + UDP-2,3-bis(3-hydroxytetradecanoyl)-D-glucosamine = 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(1->6)-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate + H(+) + UDP.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103329172 1 405 + 405 Gaps:3 86.32 468 77.23 0.0 probable lipid-A-disaccharide synthase mitochondrial
blastp_kegg lcl|pxb:103955009 1 405 + 405 Gaps:1 85.77 471 76.98 0.0 probable lipid-A-disaccharide synthase mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa026476mg 16 405 + 390 Gaps:3 86.38 448 79.33 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s15850g 5 406 + 402 none 86.64 464 75.12 0.0 POPTRDRAFT_246835 hypothetical protein
blastp_kegg lcl|vvi:100255117 1 399 + 399 Gaps:1 86.52 460 77.64 0.0 lipid-A-disaccharide synthase-like
blastp_kegg lcl|rcu:RCOM_0511200 17 399 + 383 none 81.66 469 77.81 0.0 Lipid-A-disaccharide synthase putative (EC:2.4.1.182)
blastp_kegg lcl|fve:101312182 2 397 + 396 Gaps:3 83.44 471 77.10 0.0 lipid-A-disaccharide synthase-like
blastp_kegg lcl|tcc:TCM_002215 8 398 + 391 Gaps:7 77.89 511 75.38 0.0 Lipid-A-disaccharide synthase isoform 1
blastp_kegg lcl|mdm:103442673 8 409 + 402 Gaps:2 84.93 471 77.25 0.0 probable lipid-A-disaccharide synthase mitochondrial
blastp_kegg lcl|cit:102607019 1 409 + 409 Gaps:5 87.47 471 72.57 0.0 probable lipid-A-disaccharide synthase mitochondrial-like
blastp_uniprot_sprot sp|F4IF99|LPXB_ARATH 12 398 + 387 Gaps:7 83.91 460 69.17 0.0 Probable lipid-A-disaccharide synthase mitochondrial OS Arabidopsis thaliana GN LPXB PE 2 SV 1
blastp_uniprot_sprot sp|B6IST7|LPXB_RHOCS 37 395 + 359 Gaps:25 83.29 401 46.71 4e-84 Lipid-A-disaccharide synthase OS Rhodospirillum centenum (strain ATCC 51521 / SW) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q5FUA3|LPXB_GLUOX 39 395 + 357 Gaps:28 79.28 415 40.12 2e-71 Lipid-A-disaccharide synthase OS Gluconobacter oxydans (strain 621H) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q0BS63|LPXB_GRABC 39 398 + 360 Gaps:28 84.48 393 40.06 3e-65 Lipid-A-disaccharide synthase OS Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q2W4D7|LPXB_MAGSA 39 400 + 362 Gaps:28 86.67 390 39.94 2e-60 Lipid-A-disaccharide synthase OS Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q1D393|LPXB_MYXXD 38 395 + 358 Gaps:29 85.90 383 38.30 3e-56 Lipid-A-disaccharide synthase OS Myxococcus xanthus (strain DK 1622) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q1QMM4|LPXB_NITHX 29 432 + 404 Gaps:29 95.20 396 34.75 1e-54 Lipid-A-disaccharide synthase OS Nitrobacter hamburgensis (strain X14 / DSM 10229) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q5LSU1|LPXB_RUEPO 37 398 + 362 Gaps:31 85.54 401 37.32 4e-54 Lipid-A-disaccharide synthase OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q3SRI5|LPXB_NITWN 29 398 + 370 Gaps:28 86.87 396 37.21 7e-53 Lipid-A-disaccharide synthase OS Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN lpxB PE 3 SV 1
blastp_uniprot_sprot sp|Q5QYW1|LPXB_IDILO 38 383 + 346 Gaps:31 84.17 379 37.30 1e-51 Lipid-A-disaccharide synthase OS Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN lpxB PE 3 SV 1
rpsblast_cdd gnl|CDD|178802 37 399 + 363 Gaps:32 88.16 380 39.40 2e-83 PRK00025 lpxB lipid-A-disaccharide synthase Reviewed.
rpsblast_cdd gnl|CDD|31106 37 399 + 363 Gaps:25 88.71 381 37.28 7e-78 COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis outer membrane].
rpsblast_cdd gnl|CDD|111570 39 395 + 357 Gaps:26 88.74 373 35.95 1e-59 pfam02684 LpxB Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2 3-bis(3-hydroxytetradecanoyl) glucosamine + 2 3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate < > UDP + 2 3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1 6 -beta-D-2 3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
rpsblast_cdd gnl|CDD|129319 39 395 + 357 Gaps:32 85.97 385 34.44 1e-47 TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA.
rpsblast_cdd gnl|CDD|167141 40 383 + 344 Gaps:42 52.63 608 33.75 5e-34 PRK01021 lpxB lipid-A-disaccharide synthase Reviewed.
rpsblast_cdd gnl|CDD|184498 85 379 + 295 Gaps:58 71.76 347 32.93 1e-22 PRK14089 PRK14089 ipid-A-disaccharide synthase Provisional.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 14 398 385 PTHR30372:SF0 none none none
Pfam 39 396 358 PF02684 "KEGG:00540+2.4.1.182","UniPathway:UPA00359" Lipid-A-disaccharide synthetase IPR003835
SUPERFAMILY 38 358 321 SSF53756 none none none
PANTHER 14 398 385 PTHR30372 none none none
TIGRFAM 39 397 359 TIGR00215 "KEGG:00540+2.4.1.182","UniPathway:UPA00359" lpxB: lipid-A-disaccharide synthase IPR003835

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting