Protein : Qrob_P0577530.2 Q. robur
Protein Identifier  ? Qrob_P0577530.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 2.3.3.13 - 2-isopropylmalate synthase. Code Enzyme  EC:2.3.3.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 349  
Kegg Orthology  K01649
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_007G004600g 19 335 + 317 Gaps:24 73.33 435 79.31 6e-176 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1267040 1 335 + 335 Gaps:23 53.16 632 78.27 3e-174 isopropylmalate synthase putative (EC:2.3.3.13)
blastp_kegg lcl|cit:102620455 47 335 + 289 Gaps:5 46.13 620 86.71 5e-174 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|fve:101309776 66 335 + 270 none 42.99 628 90.00 4e-173 2-isopropylmalate synthase 2 chloroplastic-like
blastp_kegg lcl|mdm:103454775 1 335 + 335 Gaps:9 71.73 474 73.53 5e-173 2-isopropylmalate synthase 2 chloroplastic-like
blastp_kegg lcl|ath:AT1G74040 60 335 + 276 none 43.74 631 86.59 9e-173 IMS1 2-isopropylmalate synthase 2
blastp_kegg lcl|mdm:103405612 1 335 + 335 Gaps:12 71.43 469 74.93 1e-172 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|pmum:103331792 51 335 + 285 Gaps:7 45.18 633 85.66 1e-171 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|cmo:103496846 50 335 + 286 Gaps:3 44.15 641 86.22 2e-171 2-isopropylmalate synthase 2 chloroplastic-like
blastp_kegg lcl|cam:101494159 1 335 + 335 Gaps:10 53.00 617 78.90 3e-170 2-isopropylmalate synthase 2 chloroplastic-like
blastp_pdb 3rmj_B 78 335 + 258 Gaps:9 67.30 370 58.23 1e-87 mol:protein length:370 2-isopropylmalate synthase
blastp_pdb 3rmj_A 78 335 + 258 Gaps:9 67.30 370 58.23 1e-87 mol:protein length:370 2-isopropylmalate synthase
blastp_pdb 3ewb_X 87 337 + 251 Gaps:9 82.59 293 52.89 4e-82 mol:protein length:293 2-isopropylmalate synthase
blastp_pdb 3eeg_B 89 335 + 247 Gaps:9 73.23 325 52.10 3e-76 mol:protein length:325 2-isopropylmalate synthase
blastp_pdb 3eeg_A 89 335 + 247 Gaps:9 73.23 325 52.10 3e-76 mol:protein length:325 2-isopropylmalate synthase
blastp_pdb 3mi3_B 58 328 + 271 Gaps:21 60.52 423 33.59 1e-23 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3mi3_A 58 328 + 271 Gaps:21 60.52 423 33.59 1e-23 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivu_B 58 328 + 271 Gaps:21 60.52 423 33.59 1e-23 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivu_A 58 328 + 271 Gaps:21 60.52 423 33.59 1e-23 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivt_B 58 328 + 271 Gaps:21 60.52 423 33.59 1e-23 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_uniprot_sprot sp|Q9C550|LEU12_ARATH 60 335 + 276 none 43.74 631 86.59 3e-174 2-isopropylmalate synthase 2 chloroplastic OS Arabidopsis thaliana GN IPMS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LPR4|LEU11_ARATH 8 335 + 328 Gaps:14 49.76 631 78.98 2e-169 2-isopropylmalate synthase 1 chloroplastic OS Arabidopsis thaliana GN IPMS1 PE 1 SV 2
blastp_uniprot_sprot sp|O04973|LEU1A_SOLPN 72 335 + 264 none 44.82 589 82.58 3e-163 2-isopropylmalate synthase A OS Solanum pennellii GN IPMSA PE 2 SV 1
blastp_uniprot_sprot sp|O04974|LEU1B_SOLPN 21 335 + 315 Gaps:4 52.12 612 71.79 1e-155 2-isopropylmalate synthase B OS Solanum pennellii GN IPMSB PE 2 SV 1
blastp_uniprot_sprot sp|Q39891|LEU1_SOYBN 55 335 + 281 Gaps:1 49.56 565 75.00 5e-145 Probable 2-isopropylmalate synthase OS Glycine max GN GMN56 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FG67|MAM1_ARATH 52 335 + 284 Gaps:1 56.32 506 61.05 1e-124 Methylthioalkylmalate synthase 1 chloroplastic OS Arabidopsis thaliana GN MAM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FN52|MAM3_ARATH 52 335 + 284 Gaps:1 56.66 503 60.00 4e-123 Methylthioalkylmalate synthase 3 chloroplastic OS Arabidopsis thaliana GN MAM3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VX04|MAM2_ARATH 52 335 + 284 Gaps:1 56.32 506 60.35 5e-122 Methylthioalkylmalate synthase 2 chloroplastic OS Arabidopsis thaliana GN MAM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8DJ32|LEU1_THEEB 73 335 + 263 Gaps:9 47.48 535 66.54 3e-104 2-isopropylmalate synthase OS Thermosynechococcus elongatus (strain BP-1) GN leuA PE 3 SV 1
blastp_uniprot_sprot sp|B7JYP4|LEU1_CYAP8 82 335 + 254 Gaps:6 46.27 536 65.73 2e-102 2-isopropylmalate synthase OS Cyanothece sp. (strain PCC 8801) GN leuA PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 87 348 262 PS50991 none Pyruvate carboxyltransferase domain. IPR000891
ProSitePatterns 94 110 17 PS00815 "KEGG:00290+2.3.3.13","KEGG:00620+2.3.3.13","MetaCyc:PWY-6871","UniPathway:UPA00048" Alpha-isopropylmalate and homocitrate synthases signature 1. IPR002034
Pfam 95 335 241 PF00682 none HMGL-like IPR000891
PANTHER 47 335 289 PTHR10277:SF9 none none none
PANTHER 47 335 289 PTHR10277 none none none
SUPERFAMILY 83 335 253 SSF51569 none none none
Gene3D 83 335 253 G3DSA:3.20.20.70 none none IPR013785

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting