Protein : Qrob_P0577490.2 Q. robur
Protein Identifier  ? Qrob_P0577490.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) 2.3.3.13 - 2-isopropylmalate synthase. Code Enzyme  EC:2.3.3.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 247  
Kegg Orthology  K01649
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101309776 28 246 + 219 Gaps:16 33.60 628 74.88 2e-97 2-isopropylmalate synthase 2 chloroplastic-like
blastp_kegg lcl|cit:102620455 21 246 + 226 Gaps:7 35.65 620 72.40 2e-97 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|pmum:103331792 51 246 + 196 Gaps:5 31.75 633 75.62 3e-97 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|mdm:103405612 1 246 + 246 Gaps:8 52.45 469 64.63 6e-97 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_007G004600g 21 246 + 226 Gaps:7 52.18 435 68.72 9e-97 hypothetical protein
blastp_kegg lcl|mdm:103454775 1 246 + 246 Gaps:37 52.95 474 64.54 8e-96 2-isopropylmalate synthase 2 chloroplastic-like
blastp_kegg lcl|pxb:103928949 1 246 + 246 Gaps:12 37.94 659 64.80 5e-95 2-isopropylmalate synthase 1 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1267040 1 246 + 246 Gaps:23 39.08 632 67.21 7e-95 isopropylmalate synthase putative (EC:2.3.3.13)
blastp_kegg lcl|ath:AT1G74040 63 246 + 184 none 29.16 631 76.63 2e-94 IMS1 2-isopropylmalate synthase 2
blastp_kegg lcl|pxb:103957925 1 246 + 246 Gaps:12 39.56 632 64.00 1e-93 2-isopropylmalate synthase 2 chloroplastic-like
blastp_pdb 3rmj_B 78 236 + 159 Gaps:9 40.54 370 60.00 3e-44 mol:protein length:370 2-isopropylmalate synthase
blastp_pdb 3rmj_A 78 236 + 159 Gaps:9 40.54 370 60.00 3e-44 mol:protein length:370 2-isopropylmalate synthase
blastp_pdb 3ewb_X 87 236 + 150 Gaps:9 48.12 293 53.19 1e-40 mol:protein length:293 2-isopropylmalate synthase
blastp_pdb 3eeg_B 89 236 + 148 Gaps:9 42.77 325 51.80 5e-36 mol:protein length:325 2-isopropylmalate synthase
blastp_pdb 3eeg_A 89 236 + 148 Gaps:9 42.77 325 51.80 5e-36 mol:protein length:325 2-isopropylmalate synthase
blastp_pdb 3mi3_B 58 246 + 189 Gaps:17 42.08 423 30.34 8e-08 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3mi3_A 58 246 + 189 Gaps:17 42.08 423 30.34 8e-08 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivu_B 58 246 + 189 Gaps:17 42.08 423 30.34 8e-08 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivu_A 58 246 + 189 Gaps:17 42.08 423 30.34 8e-08 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_pdb 3ivt_B 58 246 + 189 Gaps:17 42.08 423 30.34 8e-08 mol:protein length:423 Homocitrate synthase mitochondrial
blastp_uniprot_sprot sp|Q9C550|LEU12_ARATH 63 246 + 184 none 29.16 631 76.63 9e-96 2-isopropylmalate synthase 2 chloroplastic OS Arabidopsis thaliana GN IPMS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LPR4|LEU11_ARATH 31 246 + 216 Gaps:2 33.91 631 68.69 2e-92 2-isopropylmalate synthase 1 chloroplastic OS Arabidopsis thaliana GN IPMS1 PE 1 SV 2
blastp_uniprot_sprot sp|O04973|LEU1A_SOLPN 71 246 + 176 Gaps:5 30.73 589 67.40 3e-84 2-isopropylmalate synthase A OS Solanum pennellii GN IPMSA PE 2 SV 1
blastp_uniprot_sprot sp|O04974|LEU1B_SOLPN 1 236 + 236 Gaps:18 35.95 612 60.91 5e-81 2-isopropylmalate synthase B OS Solanum pennellii GN IPMSB PE 2 SV 1
blastp_uniprot_sprot sp|Q39891|LEU1_SOYBN 63 246 + 184 Gaps:6 33.63 565 66.84 4e-80 Probable 2-isopropylmalate synthase OS Glycine max GN GMN56 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FN52|MAM3_ARATH 52 236 + 185 Gaps:1 36.98 503 58.06 3e-70 Methylthioalkylmalate synthase 3 chloroplastic OS Arabidopsis thaliana GN MAM3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FG67|MAM1_ARATH 52 236 + 185 Gaps:1 36.76 506 58.06 1e-69 Methylthioalkylmalate synthase 1 chloroplastic OS Arabidopsis thaliana GN MAM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VX04|MAM2_ARATH 52 236 + 185 Gaps:1 36.76 506 57.53 3e-68 Methylthioalkylmalate synthase 2 chloroplastic OS Arabidopsis thaliana GN MAM2 PE 2 SV 1
blastp_uniprot_sprot sp|B7JYP4|LEU1_CYAP8 82 241 + 160 Gaps:10 29.48 536 61.39 2e-51 2-isopropylmalate synthase OS Cyanothece sp. (strain PCC 8801) GN leuA PE 3 SV 1
blastp_uniprot_sprot sp|B0JGK2|LEU1_MICAN 84 241 + 158 Gaps:9 29.46 533 57.96 3e-51 2-isopropylmalate synthase OS Microcystis aeruginosa (strain NIES-843) GN leuA PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 83 245 163 G3DSA:3.20.20.70 none none IPR013785
ProSiteProfiles 87 246 160 PS50991 none Pyruvate carboxyltransferase domain. IPR000891
SUPERFAMILY 83 244 162 SSF51569 none none none
PANTHER 47 232 186 PTHR10277 none none none
Pfam 95 240 146 PF00682 none HMGL-like IPR000891
ProSitePatterns 94 110 17 PS00815 "KEGG:00290+2.3.3.13","KEGG:00620+2.3.3.13","MetaCyc:PWY-6871","UniPathway:UPA00048" Alpha-isopropylmalate and homocitrate synthases signature 1. IPR002034
PANTHER 47 232 186 PTHR10277:SF9 none none none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting