Protein : Qrob_P0577110.2 Q. robur
Protein Identifier  ? Qrob_P0577110.2 Organism . Name  Quercus robur
Score  79.0 Score Type  egn
Protein Description  (M=2) K02880 - large subunit ribosomal protein L17e Gene Prediction Quality  validated
Protein length 

Sequence

Length: 177  
Kegg Orthology  K02880
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015934 large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103322052 7 176 + 170 none 92.90 183 96.47 3e-118 60S ribosomal protein L17-2
blastp_kegg lcl|mdm:103452128 7 176 + 170 Gaps:1 92.86 182 98.22 1e-117 60S ribosomal protein L17-2
blastp_kegg lcl|pper:PRUPE_ppa012087mg 7 176 + 170 none 92.90 183 95.88 1e-117 hypothetical protein
blastp_kegg lcl|cmo:103488896 7 176 + 170 none 92.90 183 94.12 1e-114 60S ribosomal protein L17-2
blastp_kegg lcl|csv:101211875 7 176 + 170 none 92.90 183 94.12 1e-114 60S ribosomal protein L17-2-like
blastp_kegg lcl|gmx:100816536 7 176 + 170 Gaps:2 92.82 181 94.64 3e-114 60S ribosomal protein L17-2-like
blastp_kegg lcl|gmx:100306009 7 176 + 170 Gaps:2 92.82 181 94.05 5e-114 uncharacterized LOC100306009
blastp_kegg lcl|gmx:100499784 7 176 + 170 Gaps:2 92.82 181 93.45 8e-113 uncharacterized LOC100499784
blastp_kegg lcl|vvi:100257483 7 176 + 170 none 92.90 183 90.59 3e-112 60S ribosomal protein L17-2-like
blastp_kegg lcl|cmo:103488496 7 176 + 170 none 92.90 183 92.35 4e-112 60S ribosomal protein L17-2-like
blastp_pdb 3izr_V 7 164 + 158 none 92.40 171 87.97 1e-102 mol:protein length:171 60S ribosomal protein L17 (L22p)
blastp_pdb 2zkr_r 7 159 + 153 Gaps:2 82.07 184 68.21 6e-69 mol:protein length:184 60S Ribosomal protein L17
blastp_pdb 3izs_V 7 159 + 153 Gaps:1 89.41 170 63.82 1e-61 mol:protein length:170 60S ribosomal protein rpL17 (L22p)
blastp_pdb 3u5i_P 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S ribosomal protein L17-A
blastp_pdb 3u5e_P 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S ribosomal protein L17-A
blastp_pdb 3o5h_Q 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S ribosomal protein L17-A
blastp_pdb 3o58_Q 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S ribosomal protein L17-A
blastp_pdb 2wwb_I 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S RIBOSOMAL PROTEIN L17-A
blastp_pdb 2wwa_I 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S RIBOSOMAL PROTEIN L17-A
blastp_pdb 2ww9_I 7 159 + 153 Gaps:1 82.61 184 63.82 1e-61 mol:protein length:184 60S RIBOSOMAL PROTEIN L17-A
blastp_uniprot_sprot sp|P51413|RL172_ARATH 7 169 + 163 Gaps:1 92.57 175 89.51 6e-106 60S ribosomal protein L17-2 OS Arabidopsis thaliana GN RPL17B PE 2 SV 2
blastp_uniprot_sprot sp|Q93VI3|RL171_ARATH 7 176 + 170 Gaps:7 92.61 176 89.57 8e-104 60S ribosomal protein L17-1 OS Arabidopsis thaliana GN RPL17A PE 2 SV 1
blastp_uniprot_sprot sp|O48557|RL17_MAIZE 7 163 + 157 none 91.81 171 85.35 4e-98 60S ribosomal protein L17 OS Zea mays GN RPL17 PE 2 SV 1
blastp_uniprot_sprot sp|P35266|RL171_HORVU 7 159 + 153 none 90.00 170 86.27 1e-97 60S ribosomal protein L17-1 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P35267|RL172_HORVU 7 164 + 158 none 91.86 172 81.65 4e-95 60S ribosomal protein L17-2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P37380|RL17_PODCA 5 151 + 147 Gaps:3 79.78 183 75.34 8e-73 60S ribosomal protein L17 OS Podocoryne carnea GN RPL17 PE 2 SV 1
blastp_uniprot_sprot sp|P18621|RL17_HUMAN 7 159 + 153 Gaps:2 82.07 184 68.21 2e-68 60S ribosomal protein L17 OS Homo sapiens GN RPL17 PE 1 SV 3
blastp_uniprot_sprot sp|Q5XTY7|RL17_FELCA 7 159 + 153 Gaps:2 82.07 184 68.21 2e-68 60S ribosomal protein L17 OS Felis catus GN RPL17 PE 2 SV 3
blastp_uniprot_sprot sp|P24049|RL17_RAT 7 159 + 153 Gaps:2 82.07 184 68.21 4e-68 60S ribosomal protein L17 OS Rattus norvegicus GN Rpl17 PE 2 SV 3
blastp_uniprot_sprot sp|Q3T025|RL17_BOVIN 7 159 + 153 Gaps:2 82.07 184 68.21 4e-68 60S ribosomal protein L17 OS Bos taurus GN RPL17 PE 2 SV 3

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 7 150 144 G3DSA:3.90.470.10 none none IPR001063
ProSitePatterns 120 144 25 PS00464 none Ribosomal protein L22 signature. IPR018260
Pfam 10 146 137 PF00237 none Ribosomal protein L22p/L17e IPR001063
PANTHER 7 164 158 PTHR11593 none none IPR005721
TIGRFAM 7 147 141 TIGR01038 none uL22_arch_euk: ribosomal protein uL22 IPR005721
SUPERFAMILY 7 147 141 SSF54843 none none IPR001063

0 Localization

0 Qtllist

0 Targeting