Protein : Qrob_P0573220.2 Q. robur
Protein Identifier  ? Qrob_P0573220.2 Organism . Name  Quercus robur
Protein Description  (M=2) K03146 - thiamine biosynthetic enzyme Alias (in v1)  Qrob_P0047150.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 354  
Kegg Orthology  K03146
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006950 response to stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
GO:0009228 thiamine biosynthetic process The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0011s13820g 1 352 + 352 Gaps:10 99.72 357 85.96 0.0 POPTRDRAFT_232448 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G052900g 1 353 + 353 Gaps:12 100.00 355 84.51 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0184550 6 353 + 348 Gaps:4 96.94 359 85.06 0.0 electron transfer flavoprotein-ubiquinone oxidoreductase putative
blastp_kegg lcl|vvi:100265774 1 353 + 353 Gaps:20 100.00 355 85.63 0.0 THI1-2 thiazole biosynthetic enzyme chloroplastic-like
blastp_kegg lcl|pop:POPTR_0004s01990g 4 353 + 350 Gaps:10 100.00 350 84.29 0.0 POPTRDRAFT_817727 hypothetical protein
blastp_kegg lcl|vvi:100260728 1 342 + 342 Gaps:11 96.60 353 84.46 0.0 THI1-1 thiazole biosynthetic enzyme chloroplastic-like
blastp_kegg lcl|cit:102626594 1 353 + 353 Gaps:11 100.00 356 85.67 0.0 THI1 thi thiamine thiazole synthase chloroplastic-like
blastp_kegg lcl|gmx:547462 24 353 + 330 Gaps:13 91.40 349 88.71 0.0 SC-03 thiamin biosynthetic enzyme
blastp_kegg lcl|pxb:103948770 1 342 + 342 Gaps:20 96.94 359 84.77 0.0 thiamine thiazole synthase chloroplastic-like
blastp_kegg lcl|cam:101512227 6 353 + 348 Gaps:5 98.85 349 82.03 0.0 thiamine thiazole synthase chloroplastic-like
blastp_pdb 1rp0_B 58 333 + 276 none 97.18 284 90.22 0.0 mol:protein length:284 Thiazole biosynthetic enzyme
blastp_pdb 1rp0_A 58 333 + 276 none 97.18 284 90.22 0.0 mol:protein length:284 Thiazole biosynthetic enzyme
blastp_pdb 3jsk_P 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_O 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_N 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_M 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_L 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_K 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_J 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_pdb 3jsk_I 56 330 + 275 Gaps:20 85.76 344 57.63 5e-117 mol:protein length:344 CyPBP37 protein
blastp_uniprot_sprot sp|Q38709|THI4_ALNGL 4 353 + 350 Gaps:10 100.00 352 89.77 0.0 Thiamine thiazole synthase chloroplastic OS Alnus glutinosa GN THI1 PE 2 SV 1
blastp_uniprot_sprot sp|F6H7K5|THI42_VITVI 1 353 + 353 Gaps:20 100.00 355 85.63 0.0 Thiamine thiazole synthase 2 chloroplastic OS Vitis vinifera GN THI1-2 PE 3 SV 1
blastp_uniprot_sprot sp|F6H9A9|THI41_VITVI 1 342 + 342 Gaps:11 96.60 353 84.46 0.0 Thiamine thiazole synthase 1 chloroplastic OS Vitis vinifera GN THI1-1 PE 3 SV 1
blastp_uniprot_sprot sp|O23787|THI4_CITSI 1 353 + 353 Gaps:11 100.00 356 85.67 0.0 Thiamine thiazole synthase chloroplastic OS Citrus sinensis GN THI1 PE 2 SV 1
blastp_uniprot_sprot sp|Q38814|THI4_ARATH 1 353 + 353 Gaps:16 100.00 349 81.09 0.0 Thiamine thiazole synthase chloroplastic OS Arabidopsis thaliana GN THI1 PE 1 SV 1
blastp_uniprot_sprot sp|A9SMC8|THI44_PHYPA 46 346 + 301 Gaps:3 88.63 343 82.89 0.0 Thiamine thiazole synthase 4 chloroplastic OS Physcomitrella patens subsp. patens GN THI1-4 PE 3 SV 1
blastp_uniprot_sprot sp|A9SME1|THI42_PHYPA 46 346 + 301 Gaps:3 85.39 356 83.22 0.0 Thiamine thiazole synthase 2 chloroplastic OS Physcomitrella patens subsp. patens GN THI1-2 PE 3 SV 1
blastp_uniprot_sprot sp|A9RHX1|THI41_PHYPA 41 346 + 306 Gaps:3 86.55 357 80.91 0.0 Thiamine thiazole synthase 1 chloroplastic OS Physcomitrella patens subsp. patens GN THI1-1 PE 3 SV 1
blastp_uniprot_sprot sp|A9RHW6|THI43_PHYPA 41 346 + 306 Gaps:3 86.55 357 80.26 0.0 Thiamine thiazole synthase 3 chloroplastic OS Physcomitrella patens subsp. patens GN THI1-3 PE 3 SV 1
blastp_uniprot_sprot sp|C5X2M4|THI42_SORBI 1 353 + 353 Gaps:21 100.00 352 78.12 0.0 Thiamine thiazole synthase 2 chloroplastic OS Sorghum bicolor GN THI1-2 PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 90 324 235 G3DSA:3.50.50.60 none none none
SUPERFAMILY 47 318 272 SSF51905 none none none
Hamap 5 334 330 MF_03158 none Thiamine thiazole synthase, chloroplastic [THI4]. IPR027495
TIGRFAM 70 325 256 TIGR00292 none TIGR00292: thiazole biosynthesis enzyme IPR002922
Pfam 74 307 234 PF01946 none Thi4 family none
PANTHER 45 329 285 PTHR10617 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting