Protein : Qrob_P0570600.2 Q. robur
Protein Identifier  ? Qrob_P0570600.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K02933 - large subunit ribosomal protein L6 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 103  
Kegg Orthology  K02933
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0019843 rRNA binding Interacting selectively and non-covalently with ribosomal RNA.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0007s12890g 1 102 + 102 none 100.00 102 96.08 3e-65 POPTRDRAFT_655315 hypothetical protein
blastp_kegg lcl|pmum:103339551 1 102 + 102 none 100.00 102 96.08 6e-65 60S ribosomal protein L6 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa013193mg 1 102 + 102 none 100.00 102 96.08 6e-65 hypothetical protein
blastp_kegg lcl|csv:101231813 1 102 + 102 none 100.00 102 95.10 1e-64 60S ribosomal protein L6 mitochondrial-like
blastp_kegg lcl|csv:101220210 1 102 + 102 none 100.00 102 95.10 1e-64 60S ribosomal protein L6 mitochondrial-like
blastp_kegg lcl|cmo:103485047 1 102 + 102 none 100.00 102 94.12 2e-64 60S ribosomal protein L6 mitochondrial
blastp_kegg lcl|tcc:TCM_020231 1 93 + 93 none 91.18 102 94.62 5e-59 Ribosomal protein L6 family protein
blastp_kegg lcl|rcu:RCOM_0174250 1 93 + 93 none 91.18 102 93.55 1e-58 50S ribosomal protein L6 putative
blastp_kegg lcl|gmx:100527168 1 93 + 93 none 91.18 102 93.55 1e-57 uncharacterized LOC100527168
blastp_kegg lcl|vvi:100247870 1 93 + 93 none 91.18 102 92.47 2e-57 60S ribosomal protein L6 mitochondrial-like
blastp_pdb 3bbo_I 5 102 + 98 Gaps:2 43.05 223 46.88 5e-24 mol:protein length:223 Ribosomal Protein L6
blastp_pdb 2b9p_H 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S ribosomal protein L6
blastp_pdb 2b9n_H 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S ribosomal protein L6
blastp_pdb 2b66_H 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S ribosomal protein L6
blastp_pdb 1yl3_H 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S ribosomal protein L6
blastp_pdb 1rl6_A 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 PROTEIN (RIBOSOMAL PROTEIN L6)
blastp_pdb 1ml5_h 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S RIBOSOMAL PROTEIN L6
blastp_pdb 1giy_H 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 50S RIBOSOMAL PROTEIN L6
blastp_pdb 1c04_B 5 102 + 98 Gaps:2 54.24 177 42.71 4e-19 mol:protein length:177 RIBOSOMAL PROTEIN L6
blastp_pdb 3uos_G 5 100 + 96 Gaps:2 53.11 177 42.55 1e-18 mol:protein length:177 50S ribosomal protein L6
blastp_uniprot_sprot sp|P26861|RM06_MARPO 1 100 + 100 none 99.01 101 69.00 6e-46 60S ribosomal protein L6 mitochondrial OS Marchantia polymorpha GN RPL6 PE 3 SV 2
blastp_uniprot_sprot sp|Q38US6|RL6_LACSS 5 102 + 98 Gaps:2 54.24 177 48.96 5e-25 50S ribosomal protein L6 OS Lactobacillus sakei subsp. sakei (strain 23K) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|A7HM37|RL6_FERNB 5 101 + 97 Gaps:2 51.63 184 52.63 3e-24 50S ribosomal protein L6 OS Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|Q5FM76|RL6_LACAC 5 102 + 98 Gaps:2 54.55 176 47.92 1e-23 50S ribosomal protein L6 OS Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|B3WAK3|RL6_LACCB 5 102 + 98 Gaps:2 54.55 176 51.04 2e-23 50S ribosomal protein L6 OS Lactobacillus casei (strain BL23) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|Q034Z8|RL6_LACC3 5 102 + 98 Gaps:2 54.55 176 51.04 2e-23 50S ribosomal protein L6 OS Lactobacillus casei (strain ATCC 334) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|O23049|RK6_ARATH 5 102 + 98 Gaps:2 43.05 223 46.88 2e-23 50S ribosomal protein L6 chloroplastic OS Arabidopsis thaliana GN RPL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q2JQN4|RL6_SYNJA 5 95 + 91 Gaps:2 49.17 181 50.56 2e-23 50S ribosomal protein L6 OS Synechococcus sp. (strain JA-3-3Ab) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|A8YXM0|RL6_LACH4 5 102 + 98 Gaps:2 54.55 176 47.92 2e-23 50S ribosomal protein L6 OS Lactobacillus helveticus (strain DPC 4571) GN rplF PE 3 SV 1
blastp_uniprot_sprot sp|B7IHW1|RL6_THEAB 5 101 + 97 Gaps:2 51.63 184 49.47 2e-23 50S ribosomal protein L6 OS Thermosipho africanus (strain TCF52B) GN rplF PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 23 39 17 PR00059 none Ribosomal protein L6 signature IPR019906
PRINTS 65 86 22 PR00059 none Ribosomal protein L6 signature IPR019906
Gene3D 7 101 95 G3DSA:3.90.930.12 none none IPR020040
PANTHER 1 101 101 PTHR11655:SF9 none none none
ProSitePatterns 78 86 9 PS00525 none Ribosomal protein L6 signature 1. IPR002358
SUPERFAMILY 5 100 96 SSF56053 none none IPR020040
Pfam 12 88 77 PF00347 none Ribosomal protein L6 IPR020040
PANTHER 1 101 101 PTHR11655 none none IPR000702

0 Localization

0 Qtllist

0 Targeting