Protein : Qrob_P0569850.2 Q. robur
Protein Identifier  ? Qrob_P0569850.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569//KOG1330//KOG2504 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. // Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]. // Monocarboxylate transporter [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 525  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103337334 1 523 + 523 Gaps:14 98.84 517 75.54 0.0 sugar carrier protein C-like
blastp_kegg lcl|pper:PRUPE_ppa016373mg 1 521 + 521 Gaps:14 98.45 517 76.23 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa025510mg 1 516 + 516 Gaps:14 96.74 521 76.59 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337422 1 521 + 521 Gaps:14 98.45 517 75.44 0.0 sugar carrier protein C-like
blastp_kegg lcl|pmum:103322829 1 521 + 521 Gaps:14 98.45 517 75.83 0.0 sugar carrier protein C-like
blastp_kegg lcl|rcu:RCOM_1683790 12 521 + 510 Gaps:15 97.25 509 73.74 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|pxb:103940287 12 523 + 512 Gaps:13 97.08 514 75.95 0.0 sugar carrier protein C-like
blastp_kegg lcl|mdm:103405137 1 516 + 516 Gaps:15 97.87 516 74.65 0.0 sugar transport protein 1-like
blastp_kegg lcl|gmx:100777241 1 517 + 517 Gaps:14 98.63 512 72.67 0.0 sugar transport protein 1-like
blastp_kegg lcl|pxb:103952705 1 522 + 522 Gaps:15 99.22 515 73.39 0.0 sugar transport protein 1-like
blastp_uniprot_sprot sp|Q41144|STC_RICCO 2 524 + 523 Gaps:26 99.62 523 67.95 0.0 Sugar carrier protein C OS Ricinus communis GN STC PE 2 SV 1
blastp_uniprot_sprot sp|P23586|STP1_ARATH 2 516 + 515 Gaps:14 95.98 522 69.06 0.0 Sugar transport protein 1 OS Arabidopsis thaliana GN STP1 PE 1 SV 2
blastp_uniprot_sprot sp|O65413|STP12_ARATH 4 517 + 514 Gaps:16 98.03 508 67.87 0.0 Sugar transport protein 12 OS Arabidopsis thaliana GN STP12 PE 2 SV 1
blastp_uniprot_sprot sp|Q39228|STP4_ARATH 1 515 + 515 Gaps:17 97.28 514 61.80 0.0 Sugar transport protein 4 OS Arabidopsis thaliana GN STP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LT15|STP10_ARATH 18 523 + 506 Gaps:18 94.94 514 62.09 0.0 Sugar transport protein 10 OS Arabidopsis thaliana GN STP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FMX3|STP11_ARATH 1 511 + 511 Gaps:16 97.08 514 59.92 0.0 Sugar transport protein 11 OS Arabidopsis thaliana GN STP11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SX48|STP9_ARATH 22 522 + 501 Gaps:19 93.62 517 59.50 0.0 Sugar transport protein 9 OS Arabidopsis thaliana GN STP9 PE 1 SV 1
blastp_uniprot_sprot sp|Q94AZ2|STP13_ARATH 3 517 + 515 Gaps:16 95.25 526 55.69 0.0 Sugar transport protein 13 OS Arabidopsis thaliana GN STP13 PE 1 SV 2
blastp_uniprot_sprot sp|Q07423|HEX6_RICCO 1 518 + 518 Gaps:20 98.04 510 56.60 0.0 Hexose carrier protein HEX6 OS Ricinus communis GN HEX6 PE 2 SV 1
blastp_uniprot_sprot sp|O04249|STP7_ARATH 1 513 + 513 Gaps:24 97.27 513 54.91 0.0 Sugar transport protein 7 OS Arabidopsis thaliana GN STP7 PE 2 SV 1
rpsblast_cdd gnl|CDD|200987 26 502 + 477 Gaps:37 99.78 449 36.38 3e-99 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 14 498 + 485 Gaps:43 96.47 481 35.34 2e-84 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 27 503 + 477 Gaps:82 95.82 479 30.28 1e-56 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|119392 90 236 + 147 Gaps:3 40.91 352 29.86 4e-15 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|162097 98 497 + 400 Gaps:65 73.86 505 25.74 2e-14 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|191813 92 448 + 357 Gaps:48 89.88 346 19.61 3e-13 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|162095 91 365 + 275 Gaps:17 67.84 398 23.70 4e-13 TIGR00895 2A0115 benzoate transport.
rpsblast_cdd gnl|CDD|32643 104 485 + 382 Gaps:64 84.26 394 18.07 5e-11 COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism].
rpsblast_cdd gnl|CDD|188094 120 481 + 362 Gaps:62 83.76 394 24.24 2e-10 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|162085 104 238 + 135 Gaps:4 94.33 141 27.82 1e-07 TIGR00880 2_A_01_02 Multidrug resistance protein.

40 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 21 38 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 53 252 200 G3DSA:1.20.1250.20 none none none
Phobius 367 386 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 25 491 467 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 387 397 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 121 126 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 183 206 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 149 153 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 11 521 511 PTHR24063 none none none
Phobius 320 330 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 102 120 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 26 502 477 PF00083 none Sugar (and other) transporter IPR005828
Phobius 461 465 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 440 460 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 521 511 PTHR24063:SF312 none none none
Phobius 236 296 61 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 155 180 26 PS00217 none Sugar transport proteins signature 2. IPR005829
SUPERFAMILY 88 498 411 SSF103473 none none IPR020846
Phobius 154 171 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 297 319 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 207 211 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 39 101 63 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 172 182 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 127 148 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 485 524 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 427 439 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 307 317 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 33 43 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 150 169 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663

10 Localization

Analysis Start End Length
TMHMM 333 355 22
TMHMM 466 488 22
TMHMM 397 419 22
TMHMM 362 384 22
TMHMM 213 235 22
TMHMM 94 116 22
TMHMM 129 151 22
TMHMM 440 462 22
TMHMM 21 43 22
TMHMM 184 206 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting