Protein : Qrob_P0566900.2 Q. robur
Protein Identifier  ? Qrob_P0566900.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 4.3.2.1 - Argininosuccinate lyase. Code Enzyme  EC:4.3.2.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 518  
Kegg Orthology  K01755
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0004056 argininosuccinate lyase activity Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine.
GO:0042450 arginine biosynthetic process via ornithine The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034512 1 517 + 517 Gaps:11 99.04 523 83.40 0.0 L-Aspartase-like family protein
blastp_kegg lcl|vvi:100262660 1 517 + 517 Gaps:13 99.05 525 82.31 0.0 argininosuccinate lyase-like
blastp_kegg lcl|sot:102578683 42 516 + 475 none 90.82 523 84.63 0.0 argininosuccinate lyase chloroplastic-like
blastp_kegg lcl|pxb:103944376 1 516 + 516 Gaps:9 99.23 521 80.27 0.0 argininosuccinate lyase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1039580 49 516 + 468 Gaps:6 98.54 481 86.29 0.0 argininosuccinate lyase putative (EC:4.3.2.1)
blastp_kegg lcl|pmum:103319492 1 516 + 516 Gaps:10 99.23 522 80.31 0.0 argininosuccinate lyase chloroplastic
blastp_kegg lcl|fve:101312971 1 514 + 514 Gaps:9 98.86 527 80.81 0.0 argininosuccinate lyase-like
blastp_kegg lcl|pxb:103942073 31 516 + 486 Gaps:4 92.16 523 84.44 0.0 argininosuccinate lyase chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa004216mg 1 516 + 516 Gaps:10 99.23 522 80.31 0.0 hypothetical protein
blastp_kegg lcl|mdm:103413449 31 516 + 486 Gaps:4 92.16 523 84.44 0.0 argininosuccinate lyase chloroplastic-like
blastp_pdb 2e9f_D 61 508 + 448 Gaps:2 97.40 462 51.78 3e-155 mol:protein length:462 Argininosuccinate lyase
blastp_pdb 2e9f_C 61 508 + 448 Gaps:2 97.40 462 51.78 3e-155 mol:protein length:462 Argininosuccinate lyase
blastp_pdb 2e9f_B 61 508 + 448 Gaps:2 97.40 462 51.78 3e-155 mol:protein length:462 Argininosuccinate lyase
blastp_pdb 2e9f_A 61 508 + 448 Gaps:2 97.40 462 51.78 3e-155 mol:protein length:462 Argininosuccinate lyase
blastp_pdb 1tj7_B 60 514 + 455 Gaps:1 99.78 457 44.52 4e-133 mol:protein length:457 Argininosuccinate lyase
blastp_pdb 1tj7_A 60 514 + 455 Gaps:1 99.78 457 44.52 4e-133 mol:protein length:457 Argininosuccinate lyase
blastp_pdb 1k7w_D 61 508 + 448 Gaps:1 95.51 468 42.95 5e-125 mol:protein length:468 delta 2 crystallin
blastp_pdb 1k7w_C 61 508 + 448 Gaps:1 95.51 468 42.95 5e-125 mol:protein length:468 delta 2 crystallin
blastp_pdb 1k7w_B 61 508 + 448 Gaps:1 95.51 468 42.95 5e-125 mol:protein length:468 delta 2 crystallin
blastp_pdb 1k7w_A 61 508 + 448 Gaps:1 95.51 468 42.95 5e-125 mol:protein length:468 delta 2 crystallin
blastp_uniprot_sprot sp|Q9LEU8|ARLY_ARATH 33 516 + 484 Gaps:4 93.62 517 78.31 0.0 Argininosuccinate lyase chloroplastic OS Arabidopsis thaliana GN At5g10920 PE 2 SV 1
blastp_uniprot_sprot sp|Q6AR60|ARLY_DESPS 58 499 + 442 none 95.26 464 51.81 2e-165 Argininosuccinate lyase OS Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|Q3JDS2|ARLY_NITOC 61 514 + 454 none 97.22 467 53.30 7e-162 Argininosuccinate lyase OS Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|C1D665|ARLY_LARHH 61 514 + 454 none 98.48 461 52.42 3e-160 Argininosuccinate lyase OS Laribacter hongkongensis (strain HLHK9) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|Q39Z69|ARLY_GEOMG 61 507 + 447 none 97.60 458 52.35 1e-159 Argininosuccinate lyase OS Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|Q1GXA9|ARLY_METFK 56 507 + 452 none 96.58 468 53.10 5e-159 Argininosuccinate lyase OS Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|Q67S72|ARLY_SYMTH 61 507 + 447 none 96.96 461 51.68 4e-158 Argininosuccinate lyase OS Symbiobacterium thermophilum (strain T / IAM 14863) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|B8GSV2|ARLY_THISH 61 514 + 454 none 97.22 467 51.76 5e-158 Argininosuccinate lyase OS Thioalkalivibrio sp. (strain HL-EbGR7) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|Q74GT9|ARLY_GEOSL 61 508 + 448 none 97.82 458 50.89 9e-158 Argininosuccinate lyase OS Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN argH PE 3 SV 1
blastp_uniprot_sprot sp|A5GDA7|ARLY_GEOUR 61 508 + 448 none 97.82 458 51.79 9e-158 Argininosuccinate lyase OS Geobacter uraniireducens (strain Rf4) GN argH PE 3 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 62 510 449 TIGR00838 "KEGG:00250+4.3.2.1","KEGG:00330+4.3.2.1","MetaCyc:PWY-4983","MetaCyc:PWY-4984","MetaCyc:PWY-5","MetaCyc:PWY-5154","MetaCyc:PWY-7400","UniPathway:UPA00068" argH: argininosuccinate lyase IPR009049
SUPERFAMILY 62 513 452 SSF48557 none none IPR008948
Gene3D 166 432 267 G3DSA:1.20.200.10 none none none
Pfam 423 490 68 PF14698 "KEGG:00250+4.3.2.1","KEGG:00330+4.3.2.1","MetaCyc:PWY-4983","MetaCyc:PWY-4984","MetaCyc:PWY-5","MetaCyc:PWY-5154","MetaCyc:PWY-7400","UniPathway:UPA00068" Argininosuccinate lyase C-terminal IPR029419
Gene3D 61 165 105 G3DSA:1.10.275.10 none none IPR024083
ProSitePatterns 334 343 10 PS00163 none Fumarate lyases signature. IPR020557
PANTHER 45 514 470 PTHR11444 none none IPR000362
Gene3D 433 490 58 G3DSA:1.10.40.30 none none none
PRINTS 201 221 21 PR00145 none Argininosuccinate lyase family signature none
PRINTS 290 314 25 PR00145 none Argininosuccinate lyase family signature none
PRINTS 252 268 17 PR00145 none Argininosuccinate lyase family signature none
PRINTS 160 182 23 PR00145 none Argininosuccinate lyase family signature none
PRINTS 334 350 17 PR00145 none Argininosuccinate lyase family signature none
PRINTS 369 388 20 PR00145 none Argininosuccinate lyase family signature none
Hamap 61 512 452 MF_00006 "KEGG:00250+4.3.2.1","KEGG:00330+4.3.2.1","MetaCyc:PWY-4983","MetaCyc:PWY-4984","MetaCyc:PWY-5","MetaCyc:PWY-5154","MetaCyc:PWY-7400","UniPathway:UPA00068" Argininosuccinate lyase [argH]. IPR009049
Pfam 65 359 295 PF00206 none Lyase IPR022761
PANTHER 45 514 470 PTHR11444:SF3 "KEGG:00250+4.3.2.1","KEGG:00330+4.3.2.1","MetaCyc:PWY-4983","MetaCyc:PWY-4984","MetaCyc:PWY-5","MetaCyc:PWY-5154","MetaCyc:PWY-7400","UniPathway:UPA00068";signature_desc=ARGININOSUCCINATE LYASE none IPR009049
PRINTS 334 350 17 PR00149 none Fumarate lyase superfamily signature IPR000362
PRINTS 161 179 19 PR00149 none Fumarate lyase superfamily signature IPR000362
PRINTS 206 224 19 PR00149 none Fumarate lyase superfamily signature IPR000362
PRINTS 290 317 28 PR00149 none Fumarate lyase superfamily signature IPR000362

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4

0 Targeting