Protein : Qrob_P0557610.2 Q. robur
Protein Identifier  ? Qrob_P0557610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)). Code Enzyme  EC:1.4.1.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 412  
Kegg Orthology  K00261
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006458mg 1 411 + 411 none 100.00 411 89.29 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337124 1 411 + 411 none 100.00 411 89.05 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|cic:CICLE_v10020390mg 1 410 + 410 none 100.00 410 88.54 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_014809 1 411 + 411 none 100.00 411 88.81 0.0 Glutamate dehydrogenase 2
blastp_kegg lcl|pvu:PHAVU_003G225100g 1 411 + 411 Gaps:1 100.00 412 88.59 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0015s12250g 1 411 + 411 none 100.00 411 87.59 0.0 POPTRDRAFT_575509 hypothetical protein
blastp_kegg lcl|fve:101311000 1 411 + 411 none 100.00 411 87.10 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|cit:102626102 1 410 + 410 Gaps:14 100.00 424 85.14 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|gmx:100801250 1 411 + 411 none 100.00 411 87.35 0.0 glutamate dehydrogenase 2-like
blastp_kegg lcl|pop:POPTR_0012s11500g 1 411 + 411 none 100.00 411 86.37 0.0 hypothetical protein
blastp_pdb 1b3b_F 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_E 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_D 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_C 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_B 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b3b_A 10 408 + 399 Gaps:2 96.63 415 48.38 1e-129 mol:protein length:415 PROTEIN (GLUTAMATE DEHYDROGENASE)
blastp_pdb 1b26_F 10 408 + 399 Gaps:2 96.39 416 48.13 4e-128 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_E 10 408 + 399 Gaps:2 96.39 416 48.13 4e-128 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_D 10 408 + 399 Gaps:2 96.39 416 48.13 4e-128 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_pdb 1b26_C 10 408 + 399 Gaps:2 96.39 416 48.13 4e-128 mol:protein length:416 GLUTAMATE DEHYDROGENASE
blastp_uniprot_sprot sp|Q38946|DHE2_ARATH 1 411 + 411 none 100.00 411 85.64 0.0 Glutamate dehydrogenase 2 OS Arabidopsis thaliana GN GDH2 PE 1 SV 1
blastp_uniprot_sprot sp|O04937|DHEA_NICPL 1 411 + 411 none 100.00 411 84.67 0.0 Glutamate dehydrogenase A OS Nicotiana plumbaginifolia GN GDHA PE 2 SV 1
blastp_uniprot_sprot sp|P52596|DHE3_VITVI 1 411 + 411 none 100.00 411 83.94 0.0 Glutamate dehydrogenase OS Vitis vinifera GN GDH PE 2 SV 1
blastp_uniprot_sprot sp|Q43314|DHE1_ARATH 1 411 + 411 none 100.00 411 81.75 0.0 Glutamate dehydrogenase 1 OS Arabidopsis thaliana GN GDH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S7A0|DHE3_ARATH 1 409 + 409 none 99.51 411 80.93 0.0 Probable glutamate dehydrogenase 3 OS Arabidopsis thaliana GN GSH3 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LEC8|DHEB_NICPL 1 411 + 411 none 100.00 411 80.78 0.0 Glutamate dehydrogenase B OS Nicotiana plumbaginifolia GN GDHB PE 1 SV 1
blastp_uniprot_sprot sp|Q43260|DHE3_MAIZE 1 411 + 411 none 100.00 411 81.02 0.0 Glutamate dehydrogenase OS Zea mays GN GDH1 PE 1 SV 1
blastp_uniprot_sprot sp|P93541|DHE3_SOLLC 1 411 + 411 Gaps:1 100.00 412 80.83 0.0 Glutamate dehydrogenase OS Solanum lycopersicum GN GDH1 PE 2 SV 1
blastp_uniprot_sprot sp|P96110|DHE3_THEMA 10 408 + 399 Gaps:2 96.39 416 48.38 3e-128 Glutamate dehydrogenase OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN gdhA PE 1 SV 4
blastp_uniprot_sprot sp|Q7A1B9|DHE2_STAAW 2 409 + 408 Gaps:2 98.55 414 43.87 4e-127 NAD-specific glutamate dehydrogenase OS Staphylococcus aureus (strain MW2) GN gluD PE 3 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 33 160 128 PF02812 none Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IPR006097
SUPERFAMILY 176 409 234 SSF51735 none none none
PANTHER 1 410 410 PTHR11606 none none none
Gene3D 176 409 234 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 4 178 175 SSF53223 none none none
Pfam 176 408 233 PF00208 none Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IPR006096
PANTHER 1 410 410 PTHR11606:SF5 none none none
PIRSF 1 411 411 PIRSF000185 none none IPR014362
PRINTS 209 229 21 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 88 102 15 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 336 347 12 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
PRINTS 167 189 23 PR00082 none Glutamate/leucine/phenylalanine/valine dehydrogenase signature IPR006095
SMART 178 408 231 SM00839 none Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IPR006096
Gene3D 33 174 142 G3DSA:3.40.192.10 none none none
ProSitePatterns 96 109 14 PS00074 none Glu / Leu / Phe / Val dehydrogenases active site. IPR006095

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting