Protein : Qrob_P0555510.2 Q. robur
Protein Identifier  ? Qrob_P0555510.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Code Enzyme  EC:2.4.2.39
Gene Prediction Quality  validated Protein length 

Sequence

Length: 461  
Kegg Orthology  K08238
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005794 Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa005479mg 1 460 + 460 Gaps:13 100.00 459 83.66 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338473 1 460 + 460 Gaps:1 100.00 459 82.79 0.0 putative glycosyltransferase 5
blastp_kegg lcl|pmum:103338470 1 460 + 460 Gaps:1 100.00 459 82.79 0.0 putative glycosyltransferase 5
blastp_kegg lcl|tcc:TCM_014107 1 460 + 460 Gaps:8 100.00 460 85.22 0.0 Galactosyl transferase GMA12/MNN10 family protein
blastp_kegg lcl|pxb:103931163 1 460 + 460 Gaps:4 100.00 460 83.70 0.0 putative glycosyltransferase 5
blastp_kegg lcl|mdm:103455379 1 460 + 460 Gaps:4 100.00 460 83.70 0.0 putative glycosyltransferase 5
blastp_kegg lcl|pxb:103931379 1 460 + 460 Gaps:4 100.00 460 83.26 0.0 putative glycosyltransferase 5
blastp_kegg lcl|csv:101203867 1 456 + 456 Gaps:5 98.91 460 85.05 0.0 putative glycosyltransferase 5-like
blastp_kegg lcl|csv:101224606 1 456 + 456 Gaps:5 98.91 460 84.84 0.0 putative glycosyltransferase 3-like
blastp_kegg lcl|csv:101224833 1 456 + 456 Gaps:5 98.91 460 85.05 0.0 putative glycosyltransferase 5-like
blastp_uniprot_sprot sp|Q9LF80|GT3_ARATH 1 458 + 458 Gaps:7 100.00 457 78.12 0.0 Putative glycosyltransferase 3 OS Arabidopsis thaliana GN GT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CA75|GT5_ARATH 1 453 + 453 Gaps:7 98.91 457 79.65 0.0 Putative glycosyltransferase 5 OS Arabidopsis thaliana GN GT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9U0|GT4_ARATH 22 449 + 428 Gaps:2 91.03 513 71.52 0.0 Putative glycosyltransferase 4 OS Arabidopsis thaliana GN GT4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZJ3|XT1_ARATH 40 460 + 421 Gaps:32 97.61 460 57.02 0.0 Xyloglucan 6-xylosyltransferase OS Arabidopsis thaliana GN XT1 PE 1 SV 1
blastp_uniprot_sprot sp|O22775|GT2_ARATH 40 460 + 421 Gaps:30 97.40 461 57.91 0.0 Putative glycosyltransferase 2 OS Arabidopsis thaliana GN GT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q564G7|GMGT1_CYATE 85 428 + 344 Gaps:43 88.05 435 41.78 7e-100 Galactomannan galactosyltransferase 1 OS Cyamopsis tetragonoloba GN GMGT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SZG1|GT6_ARATH 102 423 + 322 Gaps:50 81.48 432 44.03 2e-95 Glycosyltransferase 6 OS Arabidopsis thaliana GN GT6 PE 2 SV 1
blastp_uniprot_sprot sp|O81007|GT7_ARATH 88 423 + 336 Gaps:50 81.51 449 43.44 5e-94 Putative glycosyltransferase 7 OS Arabidopsis thaliana GN GT7 PE 2 SV 1
blastp_uniprot_sprot sp|Q09681|GMH2_SCHPO 104 383 + 280 Gaps:82 79.19 346 27.74 3e-08 Probable alpha-1 2-galactosyltransferase gmh2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN gmh2 PE 3 SV 1
blastp_uniprot_sprot sp|Q09679|GMH1_SCHPO 176 305 + 130 Gaps:38 48.02 329 28.48 2e-07 Probable alpha-1 2-galactosyltransferase gmh1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN gmh1 PE 3 SV 1
rpsblast_cdd gnl|CDD|178724 39 452 + 414 Gaps:8 97.90 429 71.19 0.0 PLN03182 PLN03182 xyloglucan 6-xylosyltransferase Provisional.
rpsblast_cdd gnl|CDD|178723 72 439 + 368 Gaps:61 85.43 453 45.99 1e-115 PLN03181 PLN03181 glycosyltransferase Provisional.
rpsblast_cdd gnl|CDD|203296 149 389 + 241 Gaps:57 99.58 239 39.92 5e-66 pfam05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
rpsblast_kog gnl|CDD|39945 48 422 + 375 Gaps:21 100.00 364 39.29 1e-112 KOG4748 KOG4748 KOG4748 Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism Cell wall/membrane/envelope biogenesis].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 150 388 239 PF05637 none galactosyl transferase GMA12/MNN10 family IPR008630
PANTHER 24 460 437 PTHR31311:SF4 none none none
PANTHER 24 460 437 PTHR31311 none none none

1 Localization

Analysis Start End Length
TMHMM 48 70 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting