Protein : Qrob_P0555100.2 Q. robur
Protein Identifier  ? Qrob_P0555100.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K06215 - pyridoxine biosynthesis protein [EC:4.-.-.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 312  
Kegg Orthology  K06215
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0042819 vitamin B6 biosynthetic process The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.
GO:0042823 pyridoxal phosphate biosynthetic process The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100260451 1 311 + 311 Gaps:2 100.00 309 96.12 0.0 probable pyridoxal biosynthesis protein PDX1-like
blastp_kegg lcl|rcu:RCOM_0612540 1 305 + 305 Gaps:1 92.97 327 97.37 0.0 Pyridoxin biosynthesis protein PDX1 putative
blastp_kegg lcl|cam:101489656 1 311 + 311 Gaps:2 100.00 309 95.15 0.0 pyridoxal biosynthesis protein PDX1.3-like
blastp_kegg lcl|cit:102623292 1 311 + 311 Gaps:1 100.00 310 93.55 0.0 probable pyridoxal biosynthesis protein PDX1-like
blastp_kegg lcl|sly:101257782 1 311 + 311 Gaps:2 100.00 309 94.50 0.0 probable pyridoxal biosynthesis protein PDX1-like
blastp_kegg lcl|sot:102590002 1 311 + 311 Gaps:2 100.00 309 94.17 0.0 probable pyridoxal biosynthesis protein PDX1-like
blastp_kegg lcl|fve:101293315 1 311 + 311 none 100.00 311 92.28 0.0 probable pyridoxal biosynthesis protein PDX1-like
blastp_kegg lcl|cic:CICLE_v10028683mg 1 311 + 311 Gaps:1 83.56 371 93.23 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_021693 1 311 + 311 Gaps:2 100.00 309 94.82 0.0 Aldolase-type TIM barrel family protein
blastp_kegg lcl|gmx:100816306 4 311 + 308 Gaps:2 98.39 311 94.77 0.0 pyridoxal biosynthesis protein PDX1-like
blastp_pdb 2zbt_D 17 309 + 293 Gaps:1 98.99 297 69.73 2e-146 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_C 17 309 + 293 Gaps:1 98.99 297 69.73 2e-146 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_B 17 309 + 293 Gaps:1 98.99 297 69.73 2e-146 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2zbt_A 17 309 + 293 Gaps:1 98.99 297 69.73 2e-146 mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_F 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_E 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_D 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_C 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_B 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_pdb 2nv1_A 14 300 + 287 Gaps:4 92.79 305 65.02 3e-133 mol:protein length:305 Pyridoxal biosynthesis lyase pdxS
blastp_uniprot_sprot sp|Q39963|PDX1_HEVBR 1 311 + 311 Gaps:2 100.00 309 94.82 0.0 Probable pyridoxal biosynthesis protein PDX1 OS Hevea brasiliensis GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L940|PDX13_ARATH 1 311 + 311 Gaps:2 100.00 309 93.20 0.0 Pyridoxal biosynthesis protein PDX1.3 OS Arabidopsis thaliana GN PDX13 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FT25|PDX1_PHAVU 6 311 + 306 Gaps:3 97.76 312 93.11 0.0 Pyridoxal biosynthesis protein PDX1 OS Phaseolus vulgaris GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|O80448|PDX11_ARATH 1 311 + 311 Gaps:2 100.00 309 88.67 0.0 Pyridoxal biosynthesis protein PDX1.1 OS Arabidopsis thaliana GN PDX11 PE 1 SV 1
blastp_uniprot_sprot sp|Q69LA6|PDX11_ORYSJ 4 311 + 308 Gaps:5 98.43 318 87.54 0.0 Probable pyridoxal biosynthesis protein PDX1.1 OS Oryza sativa subsp. japonica GN PDX11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9AT63|PDX1_GINBI 1 311 + 311 Gaps:2 100.00 309 88.03 0.0 Probable pyridoxal biosynthesis protein PDX1 OS Ginkgo biloba GN PDX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W3D0|PDX12_ORYSJ 4 311 + 308 Gaps:8 98.40 313 85.06 0.0 Probable pyridoxal biosynthesis protein PDX1.2 OS Oryza sativa subsp. japonica GN PDX12 PE 2 SV 1
blastp_uniprot_sprot sp|B8G663|PDXS_CHLAD 21 309 + 289 none 98.63 293 74.74 5e-161 Pyridoxal biosynthesis lyase PdxS OS Chloroflexus aggregans (strain MD-66 / DSM 9485) GN pdxS PE 3 SV 1
blastp_uniprot_sprot sp|B9LIK3|PDXS_CHLSY 21 299 + 279 none 95.22 293 76.70 8e-161 Pyridoxal biosynthesis lyase PdxS OS Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN pdxS PE 3 SV 1
blastp_uniprot_sprot sp|A9WFT9|PDXS_CHLAA 21 299 + 279 none 95.22 293 76.70 8e-161 Pyridoxal biosynthesis lyase PdxS OS Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN pdxS PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 36 282 247 SSF51366 none none IPR011060
ProSiteProfiles 27 311 285 PS51129 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" PdxS/SNZ family profile. IPR001852
Pfam 24 230 207 PF01680 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" SOR/SNZ family IPR001852
PIRSF 14 311 298 PIRSF029271 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" none IPR001852
PANTHER 2 311 310 PTHR31829:SF0 none none none
TIGRFAM 27 300 274 TIGR00343 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 IPR001852
ProSitePatterns 223 241 19 PS01235 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" PdxS/SNZ family signature. IPR001852
Hamap 22 311 290 MF_01824 "KEGG:00750+4.3.3.6","MetaCyc:PWY-6466","UniPathway:UPA00245" Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. IPR001852
Gene3D 42 178 137 G3DSA:3.20.20.70 none none IPR013785
Gene3D 210 299 90 G3DSA:3.20.20.70 none none IPR013785
PANTHER 2 311 310 PTHR31829 none none none

0 Localization

0 Qtllist

0 Targeting