Protein : Qrob_P0552280.2 Q. robur
Protein Identifier  ? Qrob_P0552280.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR10265 - CYCLIN-DEPENDENT KINASE INHIBITOR 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 230  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity Stops, prevents or reduces the activity of a cyclin-dependent protein serine/threonine kinase.
GO:0007050 cell cycle arrest A regulatory process that halts progression through the cell cycle during one of the normal phases (G1, S, G2, M).

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103963509 1 229 + 229 Gaps:15 100.00 236 61.86 1e-89 cyclin-dependent kinase inhibitor 5-like
blastp_kegg lcl|fve:101295992 1 229 + 229 Gaps:16 100.00 219 64.38 2e-89 cyclin-dependent kinase inhibitor 5-like
blastp_kegg lcl|mdm:103443487 1 229 + 229 Gaps:11 100.00 236 60.17 4e-89 cyclin-dependent kinase inhibitor 5-like
blastp_kegg lcl|tcc:TCM_020342 1 229 + 229 Gaps:43 100.00 264 58.71 2e-88 Cyclin dependent kinase inhibitor putative
blastp_kegg lcl|pmum:103324231 1 229 + 229 Gaps:16 100.00 245 58.78 3e-87 cyclin-dependent kinase inhibitor 5
blastp_kegg lcl|pxb:103939866 1 229 + 229 Gaps:11 100.00 236 58.90 1e-86 cyclin-dependent kinase inhibitor 5-like
blastp_kegg lcl|pxb:103939865 1 229 + 229 Gaps:11 100.00 236 58.90 1e-86 cyclin-dependent kinase inhibitor 5-like
blastp_kegg lcl|pxb:103934410 1 229 + 229 Gaps:11 100.00 236 58.47 1e-86 cyclin-dependent kinase inhibitor 4-like
blastp_kegg lcl|pper:PRUPE_ppa010514mg 1 229 + 229 Gaps:22 100.00 247 57.09 3e-85 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G133100g 1 229 + 229 Gaps:35 100.00 226 62.39 2e-82 hypothetical protein
blastp_uniprot_sprot sp|Q9FKB5|KRP3_ARATH 1 229 + 229 Gaps:37 100.00 222 45.95 1e-47 Cyclin-dependent kinase inhibitor 3 OS Arabidopsis thaliana GN KRP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q283L0|KRP5_ORYSJ 1 228 + 228 Gaps:46 99.55 221 47.73 6e-46 Cyclin-dependent kinase inhibitor 5 OS Oryza sativa subsp. japonica GN KRP5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GYJ3|KRP4_ARATH 1 228 + 228 Gaps:80 99.65 289 39.24 3e-42 Cyclin-dependent kinase inhibitor 4 OS Arabidopsis thaliana GN KRP4 PE 1 SV 2
blastp_uniprot_sprot sp|Q7XDH8|KRP4_ORYSJ 128 228 + 101 none 52.06 194 58.42 1e-30 Cyclin-dependent kinase inhibitor 4 OS Oryza sativa subsp. japonica GN KRP4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LRY0|KRP5_ARATH 1 229 + 229 Gaps:66 100.00 189 44.97 2e-24 Cyclin-dependent kinase inhibitor 5 OS Arabidopsis thaliana GN KRP5 PE 1 SV 1
blastp_uniprot_sprot sp|Q94CL9|KRP7_ARATH 184 229 + 46 none 23.59 195 54.35 2e-11 Cyclin-dependent kinase inhibitor 7 OS Arabidopsis thaliana GN KRP7 PE 1 SV 2
blastp_uniprot_sprot sp|Q0WNX9|KRP6_ARATH 160 227 + 68 Gaps:3 35.20 196 43.48 1e-10 Cyclin-dependent kinase inhibitor 6 OS Arabidopsis thaliana GN KRP6 PE 1 SV 2
blastp_uniprot_sprot sp|Q67J15|KRP6_ORYSJ 166 229 + 64 Gaps:3 70.93 86 37.70 2e-08 Cyclin-dependent kinase inhibitor 6 OS Oryza sativa subsp. japonica GN KRP6 PE 3 SV 1
blastp_uniprot_sprot sp|Q67Y93|KRP1_ARATH 183 228 + 46 none 24.08 191 52.17 2e-06 Cyclin-dependent kinase inhibitor 1 OS Arabidopsis thaliana GN KRP1 PE 1 SV 2
rpsblast_cdd gnl|CDD|202168 181 228 + 48 Gaps:1 96.08 51 59.18 6e-15 pfam02234 CDI Cyclin-dependent kinase inhibitor. Cell cycle progression is negatively controlled by cyclin-dependent kinases inhibitors (CDIs). CDIs are involved in cell cycle arrest at the G1 phase.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 182 228 47 G3DSA:4.10.365.10 none none none
PIRSF 1 229 229 PIRSF017811 none none IPR016701
PANTHER 1 229 229 PTHR10265:SF10 none none none
Pfam 181 228 48 PF02234 none Cyclin-dependent kinase inhibitor IPR003175
PANTHER 1 229 229 PTHR10265 none none IPR003175

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting