Protein : Qrob_P0552180.2 Q. robur
Protein Identifier  ? Qrob_P0552180.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K07897 - Ras-related protein Rab-7A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 199  
Kegg Orthology  K07897
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103937778 1 198 + 198 Gaps:9 100.00 207 94.69 2e-140 ras-related protein Rab7
blastp_kegg lcl|mdm:103405467 1 198 + 198 Gaps:9 100.00 207 94.69 2e-140 ras-related protein Rab7
blastp_kegg lcl|fve:101294676 1 198 + 198 Gaps:9 100.00 207 94.69 2e-140 ras-related protein Rab7-like
blastp_kegg lcl|pmum:103327941 1 198 + 198 Gaps:9 100.00 207 94.20 8e-140 ras-related protein Rab7
blastp_kegg lcl|pxb:103944868 1 198 + 198 Gaps:9 100.00 207 93.72 6e-139 ras-related protein Rab7-like
blastp_kegg lcl|mdm:103411660 1 198 + 198 Gaps:9 100.00 207 93.72 9e-139 ras-related protein Rab7
blastp_kegg lcl|tcc:TCM_028748 1 198 + 198 Gaps:9 100.00 207 93.24 2e-138 RAB GTPase G3D isoform 1
blastp_kegg lcl|rcu:RCOM_1494330 1 198 + 198 Gaps:9 100.00 207 93.24 4e-138 protein with unknown function (EC:3.1.4.12)
blastp_kegg lcl|vvi:100249742 1 198 + 198 Gaps:9 100.00 207 92.75 2e-137 ras-related protein Rab7-like
blastp_kegg lcl|gmx:100305824 1 198 + 198 Gaps:9 100.00 207 91.79 6e-137 uncharacterized LOC100305824
blastp_pdb 1vg8_D 1 198 + 198 Gaps:15 100.00 207 66.67 2e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_C 1 198 + 198 Gaps:15 100.00 207 66.67 2e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_B 1 198 + 198 Gaps:15 100.00 207 66.67 2e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_A 1 198 + 198 Gaps:15 100.00 207 66.67 2e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg0_B 1 198 + 198 Gaps:15 100.00 207 66.67 2e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 3law_E 1 198 + 198 Gaps:15 100.00 207 66.67 5e-92 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_D 1 198 + 198 Gaps:15 100.00 207 66.67 5e-92 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_C 1 198 + 198 Gaps:15 100.00 207 66.67 5e-92 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_B 1 198 + 198 Gaps:15 100.00 207 66.67 5e-92 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_A 1 198 + 198 Gaps:15 100.00 207 66.67 5e-92 mol:protein length:207 Ras-related protein Rab-7a
blastp_uniprot_sprot sp|O24461|RAB7_PRUAR 1 198 + 198 Gaps:9 100.00 207 92.75 1e-139 Ras-related protein Rab7 OS Prunus armeniaca PE 2 SV 1
blastp_uniprot_sprot sp|Q9XER8|RAB7_GOSHI 1 198 + 198 Gaps:9 100.00 207 91.30 4e-137 Ras-related protein Rab7 OS Gossypium hirsutum GN RAB7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C820|RAG3D_ARATH 1 198 + 198 Gaps:10 100.00 206 88.83 2e-130 Ras-related protein RABG3d OS Arabidopsis thaliana GN RABG3D PE 2 SV 1
blastp_uniprot_sprot sp|Q40787|RAB7_CENCI 1 196 + 196 Gaps:9 99.51 206 86.83 1e-129 Ras-related protein Rab7 OS Cenchrus ciliaris PE 2 SV 1
blastp_uniprot_sprot sp|Q9LW76|RAG3C_ARATH 1 198 + 198 Gaps:10 100.00 206 86.41 9e-128 Ras-related protein RABG3c OS Arabidopsis thaliana GN RABG3C PE 2 SV 1
blastp_uniprot_sprot sp|Q9LS94|RAG3F_ARATH 1 198 + 198 Gaps:10 100.00 206 84.95 5e-124 Ras-related protein RABG3f OS Arabidopsis thaliana GN RABG3F PE 2 SV 1
blastp_uniprot_sprot sp|P31022|RAB7_PEA 1 198 + 198 Gaps:10 100.00 206 83.98 6e-123 Ras-related protein Rab7 OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|P93267|RAB7_MESCR 1 198 + 198 Gaps:9 100.00 207 80.68 1e-122 Ras-related protein Rab7A OS Mesembryanthemum crystallinum PE 2 SV 1
blastp_uniprot_sprot sp|Q9XI98|RAG3E_ARATH 1 198 + 198 Gaps:10 100.00 206 82.52 5e-120 Ras-related protein RABG3e OS Arabidopsis thaliana GN RABG3E PE 2 SV 1
blastp_uniprot_sprot sp|Q41640|RAB7_VIGAC 1 198 + 198 Gaps:10 100.00 206 72.82 3e-104 Ras-related protein Rab7 OS Vigna aconitifolia PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 14 197 184 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
SMART 9 170 162 SM00175 none Rab subfamily of small GTPases IPR003579
SMART 11 170 160 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
SMART 6 170 165 SM00173 none Ras subfamily of RAS small GTPases IPR020849
Pfam 19 168 150 PF00071 none Ras family IPR001806
PRINTS 145 167 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 107 120 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 23 39 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 41 63 23 PR00449 none Transforming protein P21 ras signature IPR001806
PANTHER 1 198 198 PTHR24073:SF375 none none none
PANTHER 1 198 198 PTHR24073 none none none
ProSiteProfiles 4 198 195 PS51419 none small GTPase Rab1 family profile. none
Gene3D 4 179 176 G3DSA:3.40.50.300 none none IPR027417
TIGRFAM 22 163 142 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SUPERFAMILY 5 178 174 SSF52540 none none IPR027417

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting