Protein : Qrob_P0550690.2 Q. robur
Protein Identifier  ? Qrob_P0550690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K02634 - apocytochrome f Gene Prediction Quality  validated
Protein length 

Sequence

Length: 322  
Kegg Orthology  K02634
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0005506 iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
GO:0031361 integral component of thylakoid membrane The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:4025050 1 321 + 321 Gaps:1 100.00 320 95.62 0.0 petA ViviCp034 apocytochrome f precursor
blastp_kegg lcl|vvi:7498572 1 321 + 321 Gaps:1 100.00 320 95.62 0.0 petA ViviM_p006 cytochrome f
blastp_kegg lcl|mtr:MetrCp045 1 321 + 321 Gaps:1 100.00 320 95.00 0.0 petA cytochrome f
blastp_kegg lcl|pmum:18668044 1 321 + 321 Gaps:1 100.00 320 95.94 0.0 petA CP95_p054 cytochrome f
blastp_kegg lcl|pper:PrpeC_p034 1 321 + 321 Gaps:1 100.00 320 95.62 0.0 petA cytochrome f
blastp_kegg lcl|atr:s00334p00011840 1 321 + 321 Gaps:1 100.00 320 95.62 0.0 AMTR_s00334p00011840 hypothetical protein
blastp_kegg lcl|rcu:RCOM_ORF00056 1 321 + 321 Gaps:1 100.00 320 94.38 0.0 petA cytochrome f
blastp_kegg lcl|mtr:MTR_4g034760 1 321 + 321 Gaps:1 58.93 543 94.69 0.0 Apocytochrome f
blastp_kegg lcl|tcc:ThcaC_p033 1 321 + 321 Gaps:1 100.00 320 93.44 0.0 petA cytochrome f
blastp_kegg lcl|pop:Poptr_cp036 1 321 + 321 Gaps:1 100.00 320 94.69 0.0 petA cytochrome f
blastp_pdb 1tkw_B 37 288 + 252 none 100.00 252 92.46 1e-169 mol:protein length:252 Cytochrome f
blastp_pdb 1hcz_A 37 288 + 252 none 100.00 252 92.46 1e-169 mol:protein length:252 CYTOCHROME F
blastp_pdb 2pcf_B 37 286 + 250 none 100.00 250 92.40 4e-168 mol:protein length:250 CYTOCHROME F
blastp_pdb 1ctm_A 37 286 + 250 none 100.00 250 92.40 4e-168 mol:protein length:250 CYTOCHROME F
blastp_pdb 1q90_A 37 321 + 285 Gaps:3 97.95 292 70.98 2e-141 mol:protein length:292 Apocytochrome f
blastp_pdb 1ewh_C 37 286 + 250 Gaps:3 100.00 251 70.92 7e-128 mol:protein length:251 CYTOCHROME F
blastp_pdb 1ewh_B 37 286 + 250 Gaps:3 100.00 251 70.92 7e-128 mol:protein length:251 CYTOCHROME F
blastp_pdb 1ewh_A 37 286 + 250 Gaps:3 100.00 251 70.92 7e-128 mol:protein length:251 CYTOCHROME F
blastp_pdb 1cfm_C 37 286 + 250 Gaps:3 100.00 251 70.92 7e-128 mol:protein length:251 CYTOCHROME F
blastp_pdb 1cfm_B 37 286 + 250 Gaps:3 100.00 251 70.92 7e-128 mol:protein length:251 CYTOCHROME F
blastp_uniprot_sprot sp|Q0ZJ07|CYF_VITVI 1 321 + 321 Gaps:1 100.00 320 95.62 0.0 Apocytochrome f OS Vitis vinifera GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q2QD76|CYF_CUCSA 1 321 + 321 Gaps:1 100.00 320 96.25 0.0 Apocytochrome f OS Cucumis sativus GN petA PE 3 SV 1
blastp_uniprot_sprot sp|B1NWG3|CYF_MANES 1 321 + 321 Gaps:1 100.00 320 95.31 0.0 Apocytochrome f OS Manihot esculenta GN petA PE 3 SV 1
blastp_uniprot_sprot sp|B1A948|CYF_CARPA 1 321 + 321 Gaps:1 100.00 320 95.31 0.0 Apocytochrome f OS Carica papaya GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q09X04|CYF_MORIN 1 321 + 321 Gaps:1 100.00 320 95.00 0.0 Apocytochrome f OS Morus indica GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q09G33|CYF_PLAOC 1 321 + 321 Gaps:1 100.00 320 93.44 0.0 Apocytochrome f OS Platanus occidentalis GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q68RZ3|CYF_PANGI 1 321 + 321 Gaps:1 100.00 320 94.38 0.0 Apocytochrome f OS Panax ginseng GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q2L921|CYF_GOSHI 1 321 + 321 Gaps:1 100.00 320 93.75 0.0 Apocytochrome f OS Gossypium hirsutum GN petA PE 3 SV 1
blastp_uniprot_sprot sp|A6MM49|CYF_BUXMI 1 321 + 321 Gaps:1 100.00 320 93.12 0.0 Apocytochrome f OS Buxus microphylla GN petA PE 3 SV 1
blastp_uniprot_sprot sp|Q332W5|CYF_LACSA 1 321 + 321 Gaps:1 100.00 320 93.75 0.0 Apocytochrome f OS Lactuca sativa GN petA PE 3 SV 1

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 265 286 22 G3DSA:2.60.40.830 none none IPR024094
Gene3D 37 203 167 G3DSA:2.60.40.830 none none IPR024094
ProSiteProfiles 36 321 286 PS51010 none Cytochrome f family profile. IPR002325
Hamap 15 320 306 MF_00610 none Apocytochrome f [petA]. IPR002325
Phobius 41 286 246 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 21 40 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 267 286 20 SSF49441 none none IPR024094
SUPERFAMILY 37 204 168 SSF49441 none none IPR024094
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 283 321 39 SSF103431 none none IPR024058
Gene3D 287 321 35 G3DSA:1.20.5.700 none none IPR024058
PRINTS 32 43 12 PR00610 none Cytochrome F signature IPR002325
PRINTS 239 259 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 281 301 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 260 280 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 106 126 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 45 64 20 PR00610 none Cytochrome F signature IPR002325
PRINTS 190 213 24 PR00610 none Cytochrome F signature IPR002325
PRINTS 148 168 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 169 189 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 127 147 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 65 85 21 PR00610 none Cytochrome F signature IPR002325
PRINTS 302 319 18 PR00610 none Cytochrome F signature IPR002325
PRINTS 86 105 20 PR00610 none Cytochrome F signature IPR002325
SUPERFAMILY 204 266 63 SSF51246 none none IPR011054
Phobius 287 306 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 207 264 58 G3DSA:2.40.50.100 none none none
Phobius 307 321 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 203 321 119 PF01333 none Apocytochrome F, C-terminal IPR002325

2 Localization

Analysis Start End Length
TMHMM 287 306 19
TMHMM 19 41 22

0 Qtllist

0 Targeting