Protein : Qrob_P0546800.2 Q. robur
Protein Identifier  ? Qrob_P0546800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K00207 - dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 426  
Kegg Orthology  K00207
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338666 1 425 + 425 Gaps:4 100.00 425 88.24 0.0 dihydropyrimidine dehydrogenase [NADP(+)]
blastp_kegg lcl|pper:PRUPE_ppa006144mg 1 425 + 425 Gaps:4 100.00 425 88.00 0.0 hypothetical protein
blastp_kegg lcl|pxb:103950551 1 425 + 425 Gaps:3 100.00 424 87.26 0.0 dihydropyrimidine dehydrogenase [NADP(+)]-like
blastp_kegg lcl|mdm:103438108 1 425 + 425 Gaps:3 100.00 424 87.26 0.0 dihydropyrimidine dehydrogenase [NADP(+)]
blastp_kegg lcl|pxb:103946911 1 425 + 425 Gaps:3 100.00 424 86.79 0.0 dihydropyrimidine dehydrogenase [NADP(+)]-like
blastp_kegg lcl|tcc:TCM_012994 1 425 + 425 Gaps:5 100.00 426 86.85 0.0 Pyrimidine 1 isoform 1
blastp_kegg lcl|vvi:100249021 1 425 + 425 Gaps:4 100.00 421 87.89 0.0 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_kegg lcl|cmo:103504066 1 425 + 425 Gaps:3 100.00 424 86.56 0.0 dihydropyrimidine dehydrogenase [NADP(+)]
blastp_kegg lcl|gmx:100804632 1 425 + 425 Gaps:3 100.00 424 86.32 0.0 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_kegg lcl|csv:101229259 1 425 + 425 Gaps:3 100.00 424 86.32 0.0 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_pdb 1h7w_D 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_C 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_B 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_A 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_D 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_C 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_B 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_A 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gte_D 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gte_C 47 374 + 328 Gaps:15 30.93 1025 41.64 7e-68 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_uniprot_sprot sp|P25889|PREA_ECOLI 47 388 + 342 Gaps:15 79.56 411 43.12 4e-77 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Escherichia coli (strain K12) GN preA PE 1 SV 3
blastp_uniprot_sprot sp|Q8X643|PREA_ECO57 47 388 + 342 Gaps:15 79.18 413 43.12 4e-77 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Escherichia coli O157:H7 GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q8ZNL7|PREA_SALTY 47 403 + 357 Gaps:17 83.70 411 41.57 4e-75 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q8CHR6|DPYD_MOUSE 47 376 + 330 Gaps:10 31.41 1025 40.99 7e-70 Dihydropyrimidine dehydrogenase [NADP(+)] OS Mus musculus GN Dpyd PE 1 SV 1
blastp_uniprot_sprot sp|Q12882|DPYD_HUMAN 47 376 + 330 Gaps:10 31.41 1025 40.37 5e-69 Dihydropyrimidine dehydrogenase [NADP(+)] OS Homo sapiens GN DPYD PE 1 SV 2
blastp_uniprot_sprot sp|O89000|DPYD_RAT 47 376 + 330 Gaps:12 31.41 1025 40.99 9e-69 Dihydropyrimidine dehydrogenase [NADP(+)] OS Rattus norvegicus GN Dpyd PE 2 SV 1
blastp_uniprot_sprot sp|Q5R895|DPYD_PONAB 47 376 + 330 Gaps:10 31.41 1025 40.06 3e-68 Dihydropyrimidine dehydrogenase [NADP(+)] OS Pongo abelii GN DPYD PE 2 SV 1
blastp_uniprot_sprot sp|Q28943|DPYD_PIG 47 374 + 328 Gaps:15 30.93 1025 41.64 3e-67 Dihydropyrimidine dehydrogenase [NADP(+)] OS Sus scrofa GN DPYD PE 1 SV 1
blastp_uniprot_sprot sp|Q28007|DPYD_BOVIN 47 376 + 330 Gaps:12 31.41 1025 39.75 4e-67 Dihydropyrimidine dehydrogenase [NADP(+)] OS Bos taurus GN DPYD PE 1 SV 1
blastp_uniprot_sprot sp|Q18164|DPYD_CAEEL 45 376 + 332 Gaps:10 30.59 1059 39.81 6e-66 Dihydropyrimidine dehydrogenase [NADP(+)] OS Caenorhabditis elegans GN dpyd-1 PE 3 SV 2

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 48 376 329 TIGR01037 none pyrD_sub1_fam: dihydroorotate dehydrogenase family protein IPR005720
Gene3D 39 377 339 G3DSA:3.20.20.70 none none IPR013785
Pfam 48 361 314 PF01180 none Dihydroorotate dehydrogenase IPR005720
SUPERFAMILY 40 377 338 SSF51395 none none none
PANTHER 46 422 377 PTHR11938 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting