Protein : Qrob_P0546750.2 Q. robur
Protein Identifier  ? Qrob_P0546750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) KOG1799 - Dihydropyrimidine dehydrogenase [Nucleotide transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 176  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006144mg 29 130 + 102 none 24.00 425 93.14 2e-58 hypothetical protein
blastp_kegg lcl|pmum:103338666 29 130 + 102 none 24.00 425 93.14 3e-58 dihydropyrimidine dehydrogenase [NADP(+)]
blastp_kegg lcl|fve:101301107 29 130 + 102 none 23.67 431 93.14 1e-57 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_kegg lcl|mdm:103438108 29 130 + 102 none 24.06 424 90.20 2e-56 dihydropyrimidine dehydrogenase [NADP(+)]
blastp_kegg lcl|pxb:103946911 29 130 + 102 none 24.06 424 90.20 2e-56 dihydropyrimidine dehydrogenase [NADP(+)]-like
blastp_kegg lcl|pxb:103950551 29 130 + 102 none 24.06 424 89.22 5e-56 dihydropyrimidine dehydrogenase [NADP(+)]-like
blastp_kegg lcl|csv:101229259 29 130 + 102 none 24.06 424 90.20 8e-56 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_kegg lcl|csv:101202899 29 130 + 102 none 24.06 424 90.20 8e-56 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like
blastp_kegg lcl|sly:543719 30 130 + 101 none 23.54 429 90.10 1e-55 PYD1A PYD1A protein
blastp_kegg lcl|cic:CICLE_v10020301mg 30 130 + 101 none 25.77 392 91.09 1e-55 hypothetical protein
blastp_pdb 1h7x_D 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7x_C 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7x_B 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7x_A 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_D 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_C 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_B 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1h7w_A 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_D 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_pdb 1gth_C 31 130 + 100 Gaps:9 9.27 1025 34.74 3e-06 mol:protein length:1025 DIHYDROPYRIMIDINE DEHYDROGENASE
blastp_uniprot_sprot sp|P25889|PREA_ECOLI 31 130 + 100 Gaps:4 23.36 411 52.08 6e-18 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Escherichia coli (strain K12) GN preA PE 1 SV 3
blastp_uniprot_sprot sp|Q8X643|PREA_ECO57 31 130 + 100 Gaps:4 23.24 413 52.08 6e-18 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Escherichia coli O157:H7 GN preA PE 3 SV 1
blastp_uniprot_sprot sp|Q8ZNL7|PREA_SALTY 31 130 + 100 Gaps:4 23.36 411 52.08 3e-17 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN preA PE 3 SV 1
blastp_uniprot_sprot sp|O59185|PYRDB_PYRHO 34 130 + 97 Gaps:12 28.05 303 42.35 8e-10 Dihydroorotate dehydrogenase B (NAD(+)) catalytic subunit OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN pyrD PE 3 SV 1
blastp_uniprot_sprot sp|O66461|PYRDA_AQUAE 31 137 + 107 Gaps:10 31.70 306 37.11 9e-10 Putative dihydroorotate dehydrogenase A (fumarate) OS Aquifex aeolicus (strain VF5) GN pyrD PE 3 SV 1
blastp_uniprot_sprot sp|Q01YA2|PYRDA_SOLUE 2 135 + 134 Gaps:15 41.12 304 37.60 2e-09 Putative dihydroorotate dehydrogenase A (fumarate) OS Solibacter usitatus (strain Ellin6076) GN pyrD PE 3 SV 1
blastp_uniprot_sprot sp|A6TVS0|PYRDB_ALKMQ 31 135 + 105 Gaps:12 30.79 302 40.86 2e-09 Dihydroorotate dehydrogenase B (NAD(+)) catalytic subunit OS Alkaliphilus metalliredigens (strain QYMF) GN pyrD PE 3 SV 1
blastp_uniprot_sprot sp|Q9V0Y6|PYRDB_PYRAB 34 130 + 97 Gaps:12 28.43 299 42.35 4e-09 Dihydroorotate dehydrogenase B (NAD(+)) catalytic subunit OS Pyrococcus abyssi (strain GE5 / Orsay) GN pyrD PE 3 SV 2
blastp_uniprot_sprot sp|Q9YFI6|PYRDA_AERPE 31 164 + 134 Gaps:18 37.91 306 39.66 2e-08 Putative dihydroorotate dehydrogenase A (fumarate) OS Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN pyrD PE 3 SV 2
blastp_uniprot_sprot sp|Q8A9C3|PYRDB_BACTN 31 135 + 105 Gaps:12 30.69 303 38.71 7e-08 Dihydroorotate dehydrogenase B (NAD(+)) catalytic subunit OS Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN pyrD PE 3 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 31 136 106 PF01180 none Dihydroorotate dehydrogenase IPR005720
Gene3D 30 136 107 G3DSA:3.20.20.70 none none IPR013785
PANTHER 28 130 103 PTHR11938 none none none
SUPERFAMILY 29 135 107 SSF51395 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting