Protein : Qrob_P0541510.2 Q. robur

Protein Identifier

Qrob_P0541510.2

Organism . Name

Quercus robur

Score

97.1

Score Type

egn

Protein Description

(M=2) K18163 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6

Gene Prediction Quality

validated

Protein length

Sequence

Length: 221

Kegg Orthology

K18163

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0 Synonyms

2 GO Terms

Identifier	Name	Description
GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

18 Blast

Analysis	Hit	Start	End	Strand	Length	Note	Hit Coverage	Hit Length	Hit Pident	E Val	Hit Description
blastp_kegg	lcl\|eus:EUTSA_v10029515mg	15	216	+	202	Gaps:31	98.25	229	55.56	8e-70	hypothetical protein
blastp_kegg	lcl\|pmum:103337240	15	220	+	206	Gaps:19	79.54	303	69.71	1e-52	NADH dehydrogenase (ubiquinone) complex I assembly factor 6
blastp_kegg	lcl\|mdm:103433083	15	220	+	206	Gaps:19	79.54	303	68.88	1e-52	NADH dehydrogenase (ubiquinone) complex I assembly factor 6
blastp_kegg	lcl\|pper:PRUPE_ppa020762mg	15	220	+	206	Gaps:19	79.54	303	68.88	2e-52	hypothetical protein
blastp_kegg	lcl\|fve:101292793	15	220	+	206	Gaps:19	79.54	303	68.46	6e-51	NADH dehydrogenase (ubiquinone) complex I assembly factor 6-like
blastp_kegg	lcl\|pop:POPTR_0001s07730g	15	220	+	206	Gaps:17	75.75	301	70.61	7e-49	hypothetical protein
blastp_kegg	lcl\|rcu:RCOM_1679680	2	220	+	219	Gaps:17	68.66	351	68.88	1e-48	protein with unknown function
blastp_kegg	lcl\|mtr:MTR_5g012060	13	220	+	208	Gaps:15	73.65	315	65.52	2e-48	hypothetical protein
blastp_kegg	lcl\|cic:CICLE_v10024149mg	8	220	+	213	Gaps:17	69.16	308	68.08	4e-47	hypothetical protein
blastp_kegg	lcl\|cam:101494743	15	220	+	206	Gaps:15	75.91	303	64.35	5e-47	NADH dehydrogenase (ubiquinone) complex I assembly factor 6-like
blastp_uniprot_sprot	sp\|A7YVD7\|NDUF6_BOVIN	8	220	+	213	Gaps:24	65.17	333	36.41	1e-11	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 OS Bos taurus GN NDUFAF6 PE 2 SV 1
blastp_uniprot_sprot	sp\|Q330K2\|NDUF6_HUMAN	8	208	+	201	Gaps:18	63.06	333	34.29	1e-11	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 OS Homo sapiens GN NDUFAF6 PE 1 SV 2
blastp_uniprot_sprot	sp\|A2AIL4\|NDUF6_MOUSE	31	220	+	190	Gaps:20	56.76	333	38.10	3e-10	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 OS Mus musculus GN Ndufaf6 PE 1 SV 1
blastp_uniprot_sprot	sp\|Q9VYS5\|NDUF6_DROME	31	102	+	72	Gaps:1	21.86	334	41.10	6e-10	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 homolog OS Drosophila melanogaster GN sicily PE 2 SV 1
blastp_uniprot_sprot	sp\|D3ZN43\|NDUF6_RAT	31	220	+	190	Gaps:20	56.76	333	37.57	1e-09	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 OS Rattus norvegicus GN Ndufaf6 PE 3 SV 1
blastp_uniprot_sprot	sp\|Q54E48\|NDUF6_DICDI	101	217	+	117	Gaps:18	35.11	356	27.20	7e-06	NADH dehydrogenase (ubiquinone) complex I assembly factor 6 homolog OS Dictyostelium discoideum GN DDB_G0291852 PE 3 SV 1
rpsblast_cdd	gnl\|CDD\|201264	35	96	+	62	none	23.66	262	40.32	1e-10	pfam00494 SQS_PSY Squalene/phytoene synthase.
rpsblast_kog	gnl\|CDD\|39612	30	220	+	191	Gaps:30	78.42	292	39.74	2e-24	KOG4411 KOG4411 KOG4411 Phytoene/squalene synthetase [Lipid transport and metabolism].

6 Domain Motifs

Analysis	Begin	End	Length	Domain Identifier	Cross Ref	Description	Inter Pro
ProSiteProfiles	1	22	22	PS51257	none	Prokaryotic membrane lipoprotein lipid attachment site profile.	none
SUPERFAMILY	27	101	75	SSF48576	none	none	IPR008949
PANTHER	23	99	77	PTHR21181:SF13	none	none	none
PANTHER	23	99	77	PTHR21181	none	none	none
SUPERFAMILY	112	214	103	SSF48576	none	none	IPR008949
Pfam	36	97	62	PF00494	none	Squalene/phytoene synthase	IPR002060

0 Localization

4 Qtllist

Qtl Name	Chromosome Name	Linkage Group	Prox Marker	Dist Marker	Position QTL	Pos One	Pos Two	Test Type	Test Value	R 2
Bourran2_2015_nEpiBC_3P	Qrob_Chr12	12	s_1B73S5_217	v_7050_211	28,31	26,37	28,45	lod	4.5	11.6
Bourran2_2015_nP_3P	Qrob_Chr12	12	v_10140_295	v_838_303	16	14,69	18,01	lod	5.1	13.7
Bourran2_2002_QTL17_peak_Bud_burst_A4	Qrob_Chr12	12	s_1CTJ3J_556	s_1CTJ3J_556	0	0	25	lod	2,9	6
Bourran2_2014_nSeqBC_3P	Qrob_Chr12	12	s_1EO8V5_710	s_1A2VMU_355	11,04	0	32,58	lod	1,7196	4,7

0 Targeting

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