Protein : Qrob_P0533440.2 Q. robur
Protein Identifier  ? Qrob_P0533440.2 Organism . Name  Quercus robur
Score  96.0 Score Type  egn
Protein Description  (M=1) PTHR11010//PTHR11010:SF29 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED // SUBFAMILY NOT NAMED Code Enzyme  EC:3.4.21.26
Gene Prediction Quality  validated Protein length 

Sequence

Length: 532  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008236 serine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_000245 14 529 + 516 Gaps:56 97.53 486 77.85 0.0 Serine carboxypeptidase S28 family protein
blastp_kegg lcl|rcu:RCOM_0291690 35 531 + 497 Gaps:51 95.44 482 78.26 0.0 catalytic putative (EC:3.4.16.2)
blastp_kegg lcl|cit:102608076 15 531 + 517 Gaps:55 97.35 491 76.15 0.0 probable serine protease EDA2-like
blastp_kegg lcl|pop:POPTR_0007s13810g 11 531 + 521 Gaps:56 98.57 490 75.57 0.0 serine carboxypeptidase S28 family protein
blastp_kegg lcl|mdm:103428084 16 529 + 514 Gaps:55 92.20 513 76.11 0.0 probable serine protease EDA2
blastp_kegg lcl|mtr:MTR_5g021530 10 531 + 522 Gaps:58 100.00 478 74.27 0.0 Thymus-specific serine protease
blastp_kegg lcl|cam:101495189 39 531 + 493 Gaps:52 93.81 485 77.80 0.0 probable serine protease EDA2-like
blastp_kegg lcl|fve:101305591 39 529 + 491 Gaps:51 86.48 525 77.75 0.0 probable serine protease EDA2-like isoform 1
blastp_kegg lcl|mdm:103409271 50 529 + 480 Gaps:51 90.41 490 77.43 0.0 probable serine protease EDA2
blastp_kegg lcl|pper:PRUPE_ppa004656mg 34 529 + 496 Gaps:52 92.15 497 76.86 0.0 hypothetical protein
blastp_pdb 3n0t_D 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_C 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_B 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3n0t_A 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl peptidase 2
blastp_pdb 3jyh_D 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_C 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_B 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3jyh_A 53 492 + 440 Gaps:77 91.04 469 29.98 2e-21 mol:protein length:469 Dipeptidyl-peptidase 2
blastp_pdb 3n2z_B 93 526 + 434 Gaps:86 95.52 446 27.23 2e-18 mol:protein length:446 Lysosomal Pro-X carboxypeptidase
blastp_uniprot_sprot sp|Q1PF50|EDA2_ARATH 18 531 + 514 Gaps:61 98.77 489 64.60 0.0 Probable serine protease EDA2 OS Arabidopsis thaliana GN EDA2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9NQE7|TSSP_HUMAN 86 526 + 441 Gaps:62 85.80 514 30.84 4e-40 Thymus-specific serine protease OS Homo sapiens GN PRSS16 PE 2 SV 2
blastp_uniprot_sprot sp|Q9QXE5|TSSP_MOUSE 13 520 + 508 Gaps:106 97.45 509 30.65 9e-37 Thymus-specific serine protease OS Mus musculus GN Prss16 PE 2 SV 1
blastp_uniprot_sprot sp|P34528|YM67_CAEEL 57 520 + 464 Gaps:93 87.25 510 31.46 1e-30 Putative serine protease K12H4.7 OS Caenorhabditis elegans GN K12H4.7 PE 3 SV 2
blastp_uniprot_sprot sp|P90893|YM9I_CAEEL 26 457 + 432 Gaps:85 79.81 540 29.70 2e-27 Putative serine protease F56F10.1 OS Caenorhabditis elegans GN F56F10.1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UHL4|DPP2_HUMAN 53 492 + 440 Gaps:77 86.79 492 29.74 9e-21 Dipeptidyl peptidase 2 OS Homo sapiens GN DPP7 PE 1 SV 3
blastp_uniprot_sprot sp|Q9EPB1|DPP2_RAT 53 521 + 469 Gaps:92 88.60 500 29.57 1e-20 Dipeptidyl peptidase 2 OS Rattus norvegicus GN Dpp7 PE 1 SV 1
blastp_uniprot_sprot sp|Q7TMR0|PCP_MOUSE 89 520 + 432 Gaps:78 86.35 491 26.42 3e-19 Lysosomal Pro-X carboxypeptidase OS Mus musculus GN Prcp PE 2 SV 2
blastp_uniprot_sprot sp|P42785|PCP_HUMAN 93 527 + 435 Gaps:86 86.09 496 27.40 2e-18 Lysosomal Pro-X carboxypeptidase OS Homo sapiens GN PRCP PE 1 SV 1
blastp_uniprot_sprot sp|Q5RBU7|PCP_PONAB 93 527 + 435 Gaps:86 86.09 496 27.17 3e-18 Lysosomal Pro-X carboxypeptidase OS Pongo abelii GN PRCP PE 2 SV 1
rpsblast_cdd gnl|CDD|114307 59 471 + 413 Gaps:81 93.76 433 34.24 2e-60 pfam05577 Peptidase_S28 Serine carboxypeptidase S28. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase dipeptidyl-peptidase II and thymus-specific serine peptidase.

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 108 234 127 SSF53474 none none IPR029058
Phobius 1 10 10 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 26 389 364 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 89 529 441 PTHR11010:SF29 none none none
PANTHER 1 65 65 PTHR11010:SF29 none none none
PANTHER 1 65 65 PTHR11010 none none IPR008758
Phobius 412 531 120 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 89 529 441 PTHR11010 none none IPR008758
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 97 276 180 G3DSA:3.40.50.1820 none none IPR029058
Phobius 11 21 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 91 483 393 PF05577 none Serine carboxypeptidase S28 IPR008758
Phobius 390 411 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 27 26
TMHMM 12 34 22
TMHMM 389 411 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting